Aliases for FAM245B Gene

Subcategory (RNA class) for FAM245B Gene

lncRNA

Aliases for FAM245B Gene

  • Family With Sequence Similarity 245 Member B 2 3 5
  • FAM245B 2 5

External Ids for FAM245B Gene

Previous GeneCards Identifiers for FAM245B Gene

  • GC10M047589

Summaries for FAM245B Gene

GeneCards Summary for FAM245B Gene

FAM245B (Family With Sequence Similarity 245 Member B) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for FAM245B Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FAM245B Gene

Genomics for FAM245B Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for FAM245B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J046740 Promoter 0.3 EPDnew 600.4 +19.6 19559 0.1 FAM245B CTSLP3 SYT15 PTPN20
GH10J046721 Enhancer 0.2 Ensembl 600.7 +0.1 99 0.2 FAM245B NONHSAG005817.2-001 CTSLP3 SYT15 PTPN20
GH10J046723 Enhancer 0.2 Ensembl 0.7 +2.8 2799 0.4 FAM245B NONHSAG005817.2-001 CTSLP3 SYT15 PTPN20
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FAM245B on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for FAM245B Gene

Genomic Locations for FAM245B Gene
chr10:46,721,002-46,753,232
(GRCh38/hg38)
Size:
32,231 bases
Orientation:
Plus strand

Genomic View for FAM245B Gene

Genes around FAM245B on UCSC Golden Path with GeneCards custom track
FAM245B in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
FAM245B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM245B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM245B Gene

Proteins for FAM245B Gene

Post-translational modifications for FAM245B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM245B Gene

Domains & Families for FAM245B Gene

Gene Families for FAM245B Gene

genes like me logo Genes that share domains with FAM245B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FAM245B Gene

Function for FAM245B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM245B Gene

Localization for FAM245B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM245B Gene

Pathways & Interactions for FAM245B Gene

PathCards logo

SuperPathways for FAM245B Gene

No Data Available

Gene Ontology (GO) - Biological Process for FAM245B Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for FAM245B Gene

Drugs & Compounds for FAM245B Gene

No Compound Related Data Available

Transcripts for FAM245B Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for FAM245B Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000EED678_9606 lncRNA 1204 2

HGNC: 54133,

Ensembl: ENST00000649270 (view in UCSC) ,

URS0000EECCF1_9606 lncRNA 1070 1

Ensembl: ENST00000661138 (view in UCSC) ,

URS0000EEC361_9606 lncRNA 1004 1

Ensembl: ENST00000655955 (view in UCSC) ,

FAM245B in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for FAM245B Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM245B Gene

No ASD Table

Relevant External Links for FAM245B Gene

GeneLoc Exon Structure for
FAM245B

Expression for FAM245B Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM245B Gene

Orthologs for FAM245B Gene

Evolution for FAM245B Gene

ENSEMBL:
Gene Tree for FAM245B (if available)
TreeFam:
Gene Tree for FAM245B (if available)

No data available for Orthologs for FAM245B Gene

Paralogs for FAM245B Gene

No data available for Paralogs for FAM245B Gene

Variants for FAM245B Gene

Additional dbSNP identifiers (rs#s) for FAM245B Gene

Additional Variant Information for FAM245B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM245B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM245B Gene

Disorders for FAM245B Gene

No disorders were found for FAM245B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FAM245B Gene

Publications for FAM245B Gene

No publications were found for FAM245B Gene.

No data available for Mastermind for FAM245B Gene

Products for FAM245B Gene

Sources for FAM245B Gene