Aliases for FAM242C Gene

Aliases for FAM242C Gene

  • Family With Sequence Similarity 242 Member C 2 3 5
  • FAM242C 2 5 165
  • NONHSAG011274.2 91
  • HSALNG0091334 164

External Ids for FAM242C Gene

Previous GeneCards Identifiers for FAM242C Gene

  • GC12M054094
  • GC12M054106
  • GC12M054108
  • GC12M054124
  • GC12M054086

Summaries for FAM242C Gene

GeneCards Summary for FAM242C Gene

FAM242C (Family With Sequence Similarity 242 Member C) is a Protein Coding gene.

Additional gene information for FAM242C Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FAM242C Gene

Genomics for FAM242C Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for FAM242C Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J054125 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -1.2 -1212 3.2 ZNF629 PRDM10 ZNF692 PRDM1 ZIC2 PATZ1 ZNF501 EZH2 ZNF600 ZNF341 FAM242C LINC02381 MAP3K12 CBX5 ENSG00000260470 FLJ12825 SMUG1-AS1 SMUG1
GH12J054124 Enhancer 0.3 Ensembl 600.7 +1.8 1791 0.4 EZH2 FAM242C LINC02381 FLJ12825 LOC100240734 SMUG1 HOXC4 HOXC5
GH12J054126 Enhancer 0.3 Ensembl 600.7 +1.3 1291 0.2 EZH2 FAM242C LINC02381 LOC100240734 SMUG1 HOXC4 HOXC5
GH12J054130 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -8.8 -8816 8.4 GATAD2A CTCF ZBTB33 FOXA1 PRDM1 ZIC2 ZNF776 ZSCAN4 PATZ1 REST FLJ12825 TARBP2 ENSG00000248576 SMUG1 MIR615 HOXC4 HOXC5 HOXC6 ENSG00000260470 HOXC8
GH12J054129 Enhancer 0.8 Ensembl dbSUPER 0.7 -3.4 -3408 0.4 RNF2 ZNF512 NFRKB ZNF300 MTA2 PRDM1 MCM7 PHB2 ARNT ZNF621 HNRNPA1 PFDN5 ENSG00000260470 FAM242C LINC02381 SMUG1-AS1 SMUG1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FAM242C on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for FAM242C Gene

Genomic Locations for FAM242C Gene
chr12:54,085,132-54,125,992
(GRCh38/hg38)
Size:
40,861 bases
Orientation:
Minus strand
chr12:54,478,916-54,519,776
(GRCh37/hg19)
Size:
40,861 bases
Orientation:
Minus strand

Genomic View for FAM242C Gene

Genes around FAM242C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM242C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM242C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for FAM242C Gene

Proteins for FAM242C Gene

Post-translational modifications for FAM242C Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM242C Gene

Domains & Families for FAM242C Gene

Gene Families for FAM242C Gene

genes like me logo Genes that share domains with FAM242C: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FAM242C Gene

Function for FAM242C Gene

Phenotypes From GWAS Catalog for FAM242C Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM242C Gene

Localization for FAM242C Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM242C Gene

Pathways & Interactions for FAM242C Gene

PathCards logo

SuperPathways for FAM242C Gene

No Data Available

Interacting Proteins for FAM242C Gene

Gene Ontology (GO) - Biological Process for FAM242C Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM242C Gene

Drugs & Compounds for FAM242C Gene

No Compound Related Data Available

Transcripts for FAM242C Gene

mRNA/cDNA for FAM242C Gene

4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
5 RNACentral transcripts :
5 NONCODE transcripts :
5 LncBook transcripts :
5 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM242C Gene

No ASD Table

Relevant External Links for FAM242C Gene

GeneLoc Exon Structure for
FAM242C

Expression for FAM242C Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM242C Gene

Orthologs for FAM242C Gene

Evolution for FAM242C Gene

ENSEMBL:
Gene Tree for FAM242C (if available)
TreeFam:
Gene Tree for FAM242C (if available)

No data available for Orthologs for FAM242C Gene

Paralogs for FAM242C Gene

No data available for Paralogs for FAM242C Gene

Variants for FAM242C Gene

Additional Variant Information for FAM242C Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM242C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM242C Gene

Disorders for FAM242C Gene

No disorders were found for FAM242C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FAM242C Gene

Publications for FAM242C Gene

No publications were found for FAM242C Gene.

No data available for Mastermind for FAM242C Gene

Products for FAM242C Gene

Sources for FAM242C Gene