Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FAM241B Gene

Aliases for FAM241B Gene

  • Family With Sequence Similarity 241 Member B 2 3 5
  • C10orf35 3 4
  • Chromosome 10 Open Reading Frame 35 2
  • Uncharacterized Protein C10orf35 3
  • Uncharacterized Protein FAM241B 3

External Ids for FAM241B Gene

Previous HGNC Symbols for FAM241B Gene

  • C10orf35

Summaries for FAM241B Gene

GeneCards Summary for FAM241B Gene

FAM241B (Family With Sequence Similarity 241 Member B) is a Protein Coding gene.

Additional gene information for FAM241B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM241B Gene

Genomics for FAM241B Gene

GeneHancer (GH) Regulatory Elements for FAM241B Gene

Promoters and enhancers for FAM241B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J069629 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 663 0.0 -20 1.2 ATF1 ARNT SIN3A GLI4 ZNF2 ZBTB7B ETS1 GLIS2 E2F8 ZNF143 FAM241B CCAR1 SAR1A DDX50 MTND1P20
GH10J069572 Promoter 0.9 EPDnew 650.2 -57.3 -57304 0.1 ZNF777 SUZ12 SP2 ELF1 ZNF335 ZFHX2 GLIS2 ZNF600 ZBTB26 EZH2 LOC101929021 NEUROG3 FAM241B LOC105378345
GH10J069445 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 10.6 -180.7 -180650 9 PKNOX1 FOXA2 NEUROD1 SIN3A ZNF213 ZNF143 FOS SP3 CEBPZ NFYC TSPAN15 DDX50 CCAR1 DDX21 TYSND1 FAM241B VPS26A TACR2 AIFM2 ATP5MC1P7
GH10J069315 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 9.8 -311.5 -311545 7.2 HDGF PKNOX1 SMAD1 FOXA2 ARNT SIN3A ZNF2 POLR2B ZNF213 E2F8 HK1 DDX50 HNRNPH3 CCAR1 TYSND1 SAR1A DDX21 ENSG00000231748 HKDC1 FAM241B
GH10J069640 Enhancer 0.7 ENCODE 21.4 +9.2 9197 0.2 CTCF MXI1 RB1 MAX CEBPG RAD21 RFX5 CC2D1A ARID2 ZNF143 FAM241B LOC105378346
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FAM241B on UCSC Golden Path with GeneCards custom track

Genomic Locations for FAM241B Gene

Genomic Locations for FAM241B Gene
chr10:69,630,243-69,633,599
(GRCh38/hg38)
Size:
3,357 bases
Orientation:
Plus strand
chr10:71,390,003-71,393,355
(GRCh37/hg19)
Size:
3,353 bases
Orientation:
Plus strand

Genomic View for FAM241B Gene

Genes around FAM241B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM241B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM241B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM241B Gene

Proteins for FAM241B Gene

  • Protein details for FAM241B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96D05-F241B_HUMAN
    Recommended name:
    Uncharacterized protein FAM241B
    Protein Accession:
    Q96D05

    Protein attributes for FAM241B Gene

    Size:
    121 amino acids
    Molecular mass:
    13238 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for FAM241B Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for FAM241B Gene

Post-translational modifications for FAM241B Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FAM241B Gene

No data available for DME Specific Peptides for FAM241B Gene

Domains & Families for FAM241B Gene

Gene Families for FAM241B Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins
  • Predicted membrane proteins

Protein Domains for FAM241B Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

Q96D05

UniProtKB/Swiss-Prot:

F241B_HUMAN :
  • Belongs to the FAM241 family.
Family:
  • Belongs to the FAM241 family.
genes like me logo Genes that share domains with FAM241B: view

No data available for Suggested Antigen Peptide Sequences for FAM241B Gene

Function for FAM241B Gene

Phenotypes From GWAS Catalog for FAM241B Gene

Gene Ontology (GO) - Molecular Function for FAM241B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with FAM241B: view
genes like me logo Genes that share phenotypes with FAM241B: view

miRNA for FAM241B Gene

miRTarBase miRNAs that target FAM241B

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for FAM241B Gene

Localization for FAM241B Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM241B Gene

Membrane; Single-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for FAM241B gene
Compartment Confidence
plasma membrane 2
mitochondrion 1
peroxisome 1
nucleus 1
cytosol 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Centrosome (2)
  • Cytosol (2)
  • Nucleus (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for FAM241B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with FAM241B: view

Pathways & Interactions for FAM241B Gene

SuperPathways for FAM241B Gene

No Data Available

Gene Ontology (GO) - Biological Process for FAM241B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM241B Gene

Drugs & Compounds for FAM241B Gene

No Compound Related Data Available

Transcripts for FAM241B Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM241B Gene

No ASD Table

Relevant External Links for FAM241B Gene

GeneLoc Exon Structure for
FAM241B
ECgene alternative splicing isoforms for
FAM241B

Expression for FAM241B Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM241B Gene:

FAM241B

Evidence on tissue expression from TISSUES for FAM241B Gene

  • Pancreas(4.1)
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM241B Gene

Orthologs for FAM241B Gene

This gene was present in the common ancestor of chordates.

Orthologs for FAM241B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C10orf35 34
  • 100 (a)
OneToOne
C10H10orf35 33
  • 99.17 (n)
cow
(Bos Taurus)
Mammalia C28H10ORF35 34
  • 94 (a)
OneToOne
C28H10orf35 33
  • 89.44 (n)
dog
(Canis familiaris)
Mammalia C10orf35 34
  • 93 (a)
OneToOne
C4H10orf35 33
  • 90 (n)
mouse
(Mus musculus)
Mammalia 2010107G23Rik 34 33
  • 85.56 (n)
OneToOne
Fam241b 16
rat
(Rattus norvegicus)
Mammalia RGD1305587 33
  • 85.28 (n)
oppossum
(Monodelphis domestica)
Mammalia C10orf35 34
  • 68 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C10orf35 34
  • 61 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C10orf35 34
  • 66 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia c10orf35 33
  • 64.1 (n)
Str.16059 33
African clawed frog
(Xenopus laevis)
Amphibia Xl.7113 33
Species where no ortholog for FAM241B was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM241B Gene

ENSEMBL:
Gene Tree for FAM241B (if available)
TreeFam:
Gene Tree for FAM241B (if available)

Paralogs for FAM241B Gene

No data available for Paralogs for FAM241B Gene

Variants for FAM241B Gene

Sequence variations from dbSNP and Humsavar for FAM241B Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000455268 -- 69,633,867(+) G/T downstream_transcript_variant
rs1002035953 -- 69,632,415(+) G/A intron_variant
rs1002698837 -- 69,629,685(+) T/C upstream_transcript_variant
rs1002930281 -- 69,633,379(+) G/A 3_prime_UTR_variant
rs1003210981 -- 69,632,032(+) C/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for FAM241B Gene

Variant ID Type Subtype PubMed ID
nsv7032 CNV insertion 18451855
nsv509356 CNV insertion 20534489
esv32737 CNV gain+loss 17666407

Variation tolerance for FAM241B Gene

Residual Variation Intolerance Score: 65.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.53; 11.45% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for FAM241B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM241B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FAM241B Gene

Disorders for FAM241B Gene

No disorders were found for FAM241B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM241B Gene

Publications for FAM241B Gene

  1. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P … Rogers J (Nature 2004) 3 4 58
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 58
  4. Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3 58
  5. Protein interactome mining defines melatonin MT1 receptors as integral component of presynaptic protein complexes of neurons. (PMID: 26514267) Benleulmi-Chaachoua A … Jockers R (Journal of pineal research 2016) 3 58

Products for FAM241B Gene

Sources for FAM241B Gene

Content
Loading form....