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Aliases for FAM231AP Gene

Aliases for FAM231AP Gene

  • Family With Sequence Similarity 231 Member A, Pseudogene 2 3
  • Family With Sequence Similarity 231 Member A 2 3 5
  • FAM231A 3 4 5
  • UPF0627 Protein ENSP00000341061/ENSP00000339743 3
  • Family With Sequence Similarity 231, Member A 2
  • FAM231A/C-Like Protein LOC102723383 3
  • Protein FAM231A/C 3
  • Protein FAM231A 3
  • FAM231C 3

External Ids for FAM231AP Gene

Previous HGNC Symbols for FAM231AP Gene

  • FAM231A

Summaries for FAM231AP Gene

GeneCards Summary for FAM231AP Gene

FAM231AP (Family With Sequence Similarity 231 Member A, Pseudogene) is a Pseudogene. An important paralog of this gene is FAM231C.

Additional gene information for FAM231AP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM231AP Gene

Genomics for FAM231AP Gene

GeneHancer (GH) Regulatory Elements for FAM231AP Gene

Promoters and enhancers for FAM231AP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I016674 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.8 +2.1 2143 0.8 HDAC1 PKNOX1 ATF1 RB1 ARNT ZBTB40 TCF12 ATF7 NCOA1 ZEB2 TRE-TTC3-1 GC01M016679 FAM231AP
GH01I016676 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.8 +4.1 4078 0.7 BATF IRF4 SCRT2 ATF7 IKZF2 RUNX3 ZNF362 CBFB JUNB SP1 GC01M016679 MST1L TRE-TTC3-1 FAM231AP
GH01I016678 Enhancer 1.2 ENCODE dbSUPER 0.4 +5.3 5258 0.4 MLX ARNT ARID4B SIN3A ZNF2 ZNF766 ZNF213 FOS KLF13 SP3 GC01M016679 CROCC MST1L SPEN TRE-TTC3-1 CROCCP3 LINC01772 FLJ37453 FAM231AP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FAM231AP on UCSC Golden Path with GeneCards custom track

Genomic Locations for FAM231AP Gene

Genomic Locations for FAM231AP Gene
chr1:16,673,003-16,673,512
(GRCh38/hg38)
Size:
510 bases
Orientation:
Plus strand
chr1:16,999,498-17,000,007
(GRCh37/hg19)

Genomic View for FAM231AP Gene

Genes around FAM231AP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM231AP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM231AP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM231AP Gene

Proteins for FAM231AP Gene

  • Protein details for FAM231AP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0DMU3-F231L_HUMAN
    Recommended name:
    FAM231A/C-like protein LOC102723383
    Protein Accession:
    P0DMU3

    Protein attributes for FAM231AP Gene

    Size:
    169 amino acids
    Molecular mass:
    18266 Da
    Quaternary structure:
    No Data Available
  • Protein details for FAM231AP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0DMU4-F231A_HUMAN
    Recommended name:
    Protein FAM231A
    Protein Accession:
    P0DMU4
    Secondary Accessions:
    • A6NEA5

    Protein attributes for FAM231AP Gene

    Size:
    169 amino acids
    Molecular mass:
    18266 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM231AP Gene

Post-translational modifications for FAM231AP Gene

No Post-translational modifications

Other Protein References for FAM231AP Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FAM231AP Gene

Domains & Families for FAM231AP Gene

Gene Families for FAM231AP Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for FAM231AP Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

P0DMU3

UniProtKB/Swiss-Prot:

F231A_HUMAN :
  • Belongs to the FAM231 family.
Family:
  • Belongs to the FAM231 family.
genes like me logo Genes that share domains with FAM231AP: view

No data available for Suggested Antigen Peptide Sequences for FAM231AP Gene

Function for FAM231AP Gene

Phenotypes for FAM231AP Gene

GenomeRNAi human phenotypes for FAM231AP:
genes like me logo Genes that share phenotypes with FAM231AP: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM231AP Gene

Localization for FAM231AP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM231AP Gene

Pathways & Interactions for FAM231AP Gene

SuperPathways for FAM231AP Gene

No Data Available

Interacting Proteins for FAM231AP Gene

Gene Ontology (GO) - Biological Process for FAM231AP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM231AP Gene

Drugs & Compounds for FAM231AP Gene

No Compound Related Data Available

Transcripts for FAM231AP Gene

mRNA/cDNA for FAM231AP Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM231AP Gene

No ASD Table

Relevant External Links for FAM231AP Gene

GeneLoc Exon Structure for
FAM231AP
ECgene alternative splicing isoforms for
FAM231AP

Expression for FAM231AP Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM231AP Gene:

FAM231AP
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM231AP Gene

Orthologs for FAM231AP Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for FAM231AP Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC745683 33
  • 99.8 (n)
-- 34
  • 99 (a)
OneToMany
Species where no ortholog for FAM231AP was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM231AP Gene

ENSEMBL:
Gene Tree for FAM231AP (if available)
TreeFam:
Gene Tree for FAM231AP (if available)

Paralogs for FAM231AP Gene

Paralogs for FAM231AP Gene

genes like me logo Genes that share paralogs with FAM231AP: view

Variants for FAM231AP Gene

Sequence variations from dbSNP and Humsavar for FAM231AP Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1037858507 -- 16,673,733(+) C/A downstream_transcript_variant
rs111246417 -- 16,673,933(+) A/C downstream_transcript_variant
rs112759166 -- 16,673,414(+) C/T coding_sequence_variant, missense_variant
rs11485899 -- 16,671,083(+) C/G upstream_transcript_variant
rs12042426 -- 16,673,638(+) C/T downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for FAM231AP Gene

Variant ID Type Subtype PubMed ID
nsv428421 CNV gain+loss 18775914
nsv3965 CNV insertion 18451855
nsv1161259 CNV duplication 26073780
nsv1161255 CNV duplication 26073780
nsv1161242 CNV duplication 26073780
nsv1150135 CNV duplication 26484159
nsv1145756 CNV duplication 26484159
nsv1116446 OTHER inversion 24896259
nsv1077283 CNV duplication 25765185
nsv1075777 CNV duplication 25765185
nsv1013011 CNV gain 25217958
nsv1009050 CNV loss 25217958
nsv1008129 CNV gain+loss 25217958
nsv1004978 CNV gain+loss 25217958
nsv1004807 CNV gain+loss 25217958
esv3892414 CNV gain 25118596
esv3577752 CNV loss 25503493
esv34697 CNV gain 17911159
esv3423215 CNV duplication 20981092
esv33965 CNV gain+loss 17666407
esv3372391 CNV duplication 20981092
esv33046 CNV loss 17666407
esv29948 CNV loss 18421352
esv29642 CNV gain+loss 19812545
esv2758925 CNV gain+loss 17122850
esv2750816 CNV gain 17911159
dgv93n100 CNV gain 25217958
dgv92n100 CNV gain 25217958
dgv91n100 CNV gain+loss 25217958
dgv90n100 CNV gain 25217958
dgv89n100 CNV gain+loss 25217958
dgv87n100 CNV loss 25217958
dgv86n100 CNV gain 25217958
dgv85n100 CNV gain 25217958
dgv83n100 CNV loss 25217958
dgv82n100 CNV gain+loss 25217958
dgv78n100 CNV loss 25217958
dgv77n100 CNV loss 25217958
dgv76n100 CNV gain 25217958
dgv75n100 CNV gain 25217958
dgv74n100 CNV gain 25217958
dgv73n100 CNV gain 25217958
dgv72n100 CNV gain+loss 25217958
dgv71n100 CNV loss 25217958
dgv70n100 CNV gain+loss 25217958
dgv68n100 CNV gain 25217958
dgv66n100 CNV gain 25217958
dgv65n100 CNV gain 25217958
dgv63n100 CNV gain 25217958
dgv62n100 CNV gain 25217958
dgv61n100 CNV gain+loss 25217958
dgv60n100 CNV loss 25217958
dgv59n100 CNV gain 25217958
dgv55n100 CNV gain+loss 25217958
dgv54n100 CNV gain 25217958
dgv53n100 CNV loss 25217958
dgv52n100 CNV gain+loss 25217958
dgv52e59 CNV duplication 20981092
dgv51n100 CNV loss 25217958
dgv51e59 CNV duplication 20981092
dgv50n106 CNV duplication 24896259
dgv50n100 CNV gain 25217958
dgv49n106 CNV duplication 24896259
dgv49n100 CNV loss 25217958
dgv49e59 CNV duplication 20981092
dgv48n100 CNV gain+loss 25217958
dgv45n100 CNV gain 25217958
dgv42n100 CNV loss 25217958
dgv41n100 CNV gain 25217958
dgv39n100 CNV gain 25217958
dgv22n67 CNV gain 20364138
dgv21n67 CNV gain 20364138
dgv21e199 CNV deletion 23128226
dgv20n67 CNV gain 20364138
dgv1e203 CNV gain+loss 21179565
dgv164n54 CNV loss 21841781
dgv10e201 CNV deletion 23290073
nsv954849 CNV duplication 24416366
nsv954848 CNV duplication 24416366
nsv945797 CNV duplication 23825009
nsv945795 CNV duplication 23825009
nsv945573 CNV duplication 23825009
nsv9324 CNV gain+loss 18304495
nsv829625 CNV gain 20364138
nsv821743 CNV gain 20364138
nsv821511 CNV duplication 20802225
nsv7173 OTHER inversion 18451855
nsv545667 CNV loss 21841781
nsv499577 OTHER inversion 21111241
nsv471655 CNV gain+loss 15918152
nsv469795 CNV gain+loss 16826518
nsv437206 CNV loss 16327808
nsv436652 OTHER inversion 17901297

Additional Variant Information for FAM231AP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM231AP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM231AP Gene

Disorders for FAM231AP Gene

Additional Disease Information for FAM231AP

No disorders were found for FAM231AP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM231AP Gene

Publications for FAM231AP Gene

  1. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 3 4 58

Products for FAM231AP Gene

Sources for FAM231AP Gene

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