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FAM230A (Family With Sequence Similarity 230 Member A) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with FAM230A include Retinitis Pigmentosa 43 and Hyperprolinemia, Type I. An important paralog of this gene is LOC101927859.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH22J018421 | Promoter | 0.3 | Ensembl | 600.7 | +0.5 | 516 | 1.4 | FAM230A ENSG00000277017 FAM247B USP18 | ||
GH22J018430 | Enhancer | 0.2 | Ensembl | 0.4 | +9.5 | 9473 | 0.7 | FAM230A ENSG00000277017 FAM247B USP18 | ||
GH22J018483 | Enhancer | 0.2 | Ensembl | 0.2 | +63.1 | 63116 | 0.6 | ENSG00000277017 FAM247B FAM230A USP18 | ||
GH22J018495 | Enhancer | 0.2 | Ensembl | 0.2 | +74.4 | 74417 | 0.4 | piR-39858-424 FAM247B FAM230A USP18 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS0000DBA62F_9606 | lncRNA | 3186 | 2 |
RefSeq: NR_136560, Ensembl: ENST00000624459 (view in UCSC) , |
URS0001980E33_9606 | lncRNA | 3202 | 1 |
RefSeq: NR_165629, |
URS0000A7765D_9606 | lncRNA | 2923 | 1 |
HGNC: 45045, |
URS0000DBA31E_9606 | lncRNA | 714 | 1 |
Ensembl: ENST00000624001 (view in UCSC) , |
URS0000DB6CA1_9606 | lncRNA | 315 | 1 |
Ensembl: ENST00000615181 (view in UCSC) , |
This gene was present in the common ancestor of chordates.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | LOC101732313 30 |
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Disorder | Aliases | PubMed IDs |
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retinitis pigmentosa 43 |
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hyperprolinemia, type i |
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digeorge syndrome |
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