Free for academic non-profit institutions. Other users need a Commercial license
Aliases for FAM225B Gene
Data sources for FAM225B Gene:
Subcategory (RNA class) for FAM225B Gene
lncRNA
Aliases for FAM225B Gene
- Family With Sequence Similarity 225 Member B (HGNC, NCBI Entrez Gene, Ensembl)
- Family With Sequence Similarity 225 Member B (Non-Protein Coding) (HGNC, NCBI Entrez Gene)
- Long Intergenic Non-Protein Coding RNA 256B (HGNC, NCBI Entrez Gene)
- Non-Protein Coding RNA 256B (HGNC, NCBI Entrez Gene)
- FAM225B (Ensembl, LNCipedia)
- Family With Sequence Similarity 225, Member B (Non-Protein Coding) (HGNC)
- Chromosome 9 Open Reading Frame 110 (HGNC)
- NONHSAG053228.2 (NONCODE)
- HSALNG0073809 (LncBook)
- NCRNA00256B (NCBI Entrez Gene)
- LINC00256B (NCBI Entrez Gene)
- C9orf110 (NCBI Entrez Gene)
External Ids for FAM225B Gene
- HGNC: 21865
- NCBI Entrez Gene: 100128385
- Ensembl: ENSG00000225684
Previous HGNC Symbols for FAM225B Gene
- C9orf110
- NCRNA00256B
- LINC00256B
Previous GeneCards Identifiers for FAM225B Gene
- GC09M115877
- GC09M115881
- GC09M115882
- GC09M115899
Summaries for FAM225B Gene
GeneCards Summary for FAM225B Gene
FAM225B (Family With Sequence Similarity 225 Member B) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for FAM225B Gene
- HGNC (21865)
- NCBI Entrez Gene (100128385)
- Ensembl (ENSG00000225684)
- Open Targets Platform(ENSG00000225684)
- Search for FAM225B at DataMed
- Search for FAM225B at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FAM225B Gene
Genomics for FAM225B Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for FAM225B Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around FAM225B on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for FAM225B Gene
Latest Assembly
- chr9:113,096,351-113,119,020
- (GRCh38/hg38)
- Size:
- 22,670 bases
- Orientation:
- Minus strand
Previous Assembly
- chr9:115,867,003-115,873,957
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 6,955 bases
- Orientation:
- Minus strand
- chr9:115,865,618-115,873,780
- (GRCh37/hg19 by Ensembl)
- Size:
- 8,163 bases
- Orientation:
- Minus strand
Genomic View for FAM225B Gene
Genes around FAM225B on UCSC Golden Path with GeneCards custom track
FAM225B in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
- Cytogenetic band:
-
- 9q32 by HGNC
- 9q32 by Entrez Gene
- 9q32 by Ensembl
FAM225B Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for FAM225B Gene
Proteins for FAM225B Gene
Post-translational modifications for FAM225B Gene
No Post-translational modifications
No data available for DME Specific Peptides for FAM225B Gene
Domains & Families for FAM225B Gene
Gene Families for FAM225B Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FAM225B Gene
Function for FAM225B Gene
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for FAM225B - Starting at $85 >
- * FAM225B CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for FAM225B - Starting at $45 >
- * FAM225B as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM225B Gene
Localization for FAM225B Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM225B Gene
Transcripts for FAM225B Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for FAM225B Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS0000188B38_9606 | lncRNA | 7380 | 3 |
Ensembl: ENST00000439875 (view in UCSC) , LNCipedia: FAM225B:3, NONCODE: NONHSAT134032.2, |
| URS0000162FE1_9606 | lncRNA | 5632 | 2 |
Ensembl: ENST00000423546 (view in UCSC) , LNCipedia: FAM225B:2, |
| URS000075B874_9606 | lncRNA | 5806 | 1 |
RefSeq: NR_024376, |
| URS0000EF0C8A_9606 | lncRNA | 1377 | 1 |
Ensembl: ENST00000668459 (view in UCSC) , |
| URS0000EEC694_9606 | lncRNA | 1344 | 1 |
Ensembl: ENST00000660977 (view in UCSC) , |
FAM225B in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for FAM225B Gene
- 51 NCBI additional mRNA sequence :
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for FAM225B - Starting at $85 >
- * FAM225B CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for FAM225B - Starting at $45 >
- * FAM225B as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
Relevant External Links for FAM225B Gene
- GeneLoc Exon Structure for
- FAM225B
Expression for FAM225B Gene
mRNA differential expression in normal tissues according to GTEx for FAM225B Gene
This gene is overexpressed in Testis (x29.9).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for FAM225B
SOURCE GeneReport for Unigene cluster for FAM225B Gene:
Hs.99052Gene Expression Assays for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM225B Gene
Orthologs for FAM225B Gene
No data available for Orthologs for FAM225B Gene
Paralogs for FAM225B Gene
No data available for Paralogs for FAM225B Gene
Variants for FAM225B Gene
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv1232n67 | CNV | gain | 20364138 |
| dgv12853n54 | CNV | loss | 21841781 |
| dgv2180e212 | CNV | gain | 25503493 |
| dgv279n111 | CNV | duplication | 26073780 |
| dgv7704n100 | CNV | loss | 25217958 |
| dgv943n27 | CNV | loss | 19166990 |
| dgv944n27 | CNV | loss | 19166990 |
| esv1001772 | OTHER | inversion | 20482838 |
| esv2421517 | CNV | deletion | 20811451 |
| esv2759710 | CNV | gain | 17122850 |
| esv2761253 | CNV | loss | 21179565 |
| esv3545336 | CNV | deletion | 23714750 |
| esv3621529 | CNV | loss | 21293372 |
| esv3621530 | CNV | gain | 21293372 |
| esv3621531 | CNV | loss | 21293372 |
| esv3891713 | CNV | loss | 25118596 |
| esv3891715 | CNV | gain | 25118596 |
| esv3891716 | CNV | loss | 25118596 |
| nsv1038932 | CNV | loss | 25217958 |
| nsv1043365 | CNV | loss | 25217958 |
| nsv1047252 | CNV | gain+loss | 25217958 |
| nsv442164 | CNV | gain+loss | 18776908 |
| nsv466495 | CNV | gain | 19166990 |
| nsv471318 | CNV | gain | 18288195 |
| nsv515822 | CNV | loss | 19592680 |
| nsv615209 | CNV | gain+loss | 21841781 |
| nsv7431 | OTHER | inversion | 18451855 |
| nsv831691 | CNV | loss | 17160897 |
| nsv982338 | CNV | duplication | 23825009 |
Additional Variant Information for FAM225B Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- FAM225B
SNP Genotyping and Copy Number Assays for research
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for FAM225B Gene
Disorders for FAM225B Gene
Additional Disease Information for FAM225B
- Atlas
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
- Open Targets Platform
- Open Targets Platform
No disorders were found for FAM225B Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM225B Gene
Publications for FAM225B Gene
- A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 3
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3
ExternalLinks
Products for FAM225B Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for FAM225B
- Origene Custom Protein Services for FAM225B
- Browse OriGene Inhibitory RNA Products For FAM225B
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for FAM225B
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For FAM225B
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for FAM225B
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for FAM225B
- Search GeneCopoeia for miRNA 3'UTR Target clone products for FAM225B
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for FAM225B
Sources for FAM225B Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB