Aliases for FAM215B Gene

Subcategory (RNA class) for FAM215B Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for FAM215B Gene

  • Family With Sequence Similarity 215 Member B 2 3 5
  • Family With Sequence Similarity 215 Member B (Non-Protein Coding) 2 3
  • ARL17A Intronic Transcript 1 (Non-Protein Coding) 2 3
  • FAM215B 2 168
  • Family With Sequence Similarity 215, Member B (Non-Protein Coding) 2
  • NONHSAG022023 92
  • ARL17A-IT1 3

External Ids for FAM215B Gene

Previous GeneCards Identifiers for FAM215B Gene

  • GC17M044639
  • GC17M044640
  • GC17M044642

Summaries for FAM215B Gene

GeneCards Summary for FAM215B Gene

FAM215B (Family With Sequence Similarity 215 Member B) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for FAM215B Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FAM215B Gene

Genomics for FAM215B Gene

GeneHancer (GH) Regulatory Elements for FAM215B Gene

Promoters and enhancers for FAM215B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J046071 Enhancer 1.2 Ensembl ENCODE dbSUPER 13.5 +489.9 489894 3.8 ZSCAN5C RBAK JUND ZNF639 ZNF354C ZNF623 ZNF510 KLF7 TEAD1 ZEB1 LINC02210 ARL17A ARL17B LRRC37A4P ENSG00000262372 KANSL1 RPS7P11 LRRC37A17P NSFP1 FAM215B
GH17J046742 Enhancer 1 Ensembl ENCODE 10 -179.7 -179706 3.4 TCF12 ZNF300 JUND FOS ZIC2 REST MYC JUN OSR2 ZNF491 piR-55985-079 KANSL1-AS1 ENSG00000253347 ARL17B ARL17A LRRC37A17P MRPL45P2 NSFP1 EFCAB13 RPS7P11
GH17J046560 Promoter 0.3 Ensembl 0.7 +3.5 3494 0.2 piR-33771-002 piR-41511-002 FAM215B ARL17A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FAM215B on UCSC Golden Path with GeneCards custom track

Genomic Locations for FAM215B Gene

Genomic Locations for FAM215B Gene
chr17:46,558,830-46,562,795
(GRCh38/hg38)
Size:
3,966 bases
Orientation:
Minus strand
chr17:44,636,196-44,640,161
(GRCh37/hg19)
Size:
3,966 bases
Orientation:
Minus strand

Genomic View for FAM215B Gene

Genes around FAM215B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM215B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM215B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM215B Gene

Proteins for FAM215B Gene

Post-translational modifications for FAM215B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM215B Gene

Domains & Families for FAM215B Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FAM215B Gene

Function for FAM215B Gene

Phenotypes From GWAS Catalog for FAM215B Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM215B Gene

Localization for FAM215B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM215B Gene

Pathways & Interactions for FAM215B Gene

PathCards logo

SuperPathways for FAM215B Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for FAM215B Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for FAM215B Gene

Drugs & Compounds for FAM215B Gene

No Compound Related Data Available

Transcripts for FAM215B Gene

mRNA/cDNA for FAM215B Gene

1 RNACentral transcripts :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM215B Gene

No ASD Table

Relevant External Links for FAM215B Gene

GeneLoc Exon Structure for
FAM215B

Expression for FAM215B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FAM215B Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for FAM215B

genes like me logo Genes that share expression patterns with FAM215B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM215B Gene

Orthologs for FAM215B Gene

Evolution for FAM215B Gene

ENSEMBL:
Gene Tree for FAM215B (if available)
TreeFam:
Gene Tree for FAM215B (if available)

No data available for Orthologs for FAM215B Gene

Paralogs for FAM215B Gene

No data available for Paralogs for FAM215B Gene

Variants for FAM215B Gene

Additional dbSNP identifiers (rs#s) for FAM215B Gene

Additional Variant Information for FAM215B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM215B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM215B Gene

Disorders for FAM215B Gene

Additional Disease Information for FAM215B

No disorders were found for FAM215B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM215B Gene

Publications for FAM215B Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

No data available for Mastermind for FAM215B Gene

Products for FAM215B Gene

Sources for FAM215B Gene