Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FAM133DP Gene

Aliases for FAM133DP Gene

  • Family With Sequence Similarity 133 Member D, Pseudogene 2 5
  • Family With Sequence Similarity 133, Member D, Pseudogene 2
  • Family With Sequence Similarity 133, Member A Pseudogene 3

External Ids for FAM133DP Gene

Previous GeneCards Identifiers for FAM133DP Gene

  • GC02M158237

Summaries for FAM133DP Gene

GeneCards Summary for FAM133DP Gene

FAM133DP (Family With Sequence Similarity 133 Member D, Pseudogene) is a Pseudogene.

Additional gene information for FAM133DP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM133DP Gene

Genomics for FAM133DP Gene

GeneHancer (GH) Regulatory Elements for FAM133DP Gene

Promoters and enhancers for FAM133DP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I157380 Promoter 0.5 Ensembl 550.8 +0.1 108 0.4 FAM133DP GC02P157378
GH02I157256 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 13.6 +120.8 120773 6.2 HDGF PKNOX1 SMAD1 ARNT POLR2B CBX5 E2F8 FOS REST MEF2D GALNT5 FAM133DP RN7SKP281
GH02I156399 Enhancer 1.3 Ensembl ENCODE 18.7 +979.8 979764 3.3 HNRNPUL1 PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A FEZF1 IRF4 YY1 GC02P156401 PIR56645 TRG-GCC2-2 TRA-CGC3-1 FAM133DP GPD2 GC02M156343 PIR58752
GH02I157896 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 13.5 -518.4 -518360 3.8 HDGF ATF1 YBX1 NCOA2 TCF12 GATA2 ARID2 FOS ATF7 MCM3 UPP2 FAM133DP ACVR1 RNU6-932P RNU6-436P LOC105373714 ENSG00000270557
GH02I157245 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 13.6 +133.8 133817 3.3 PKNOX1 SIN3A BATF IRF4 ZBTB40 ZNF766 ETV6 FOS RUNX3 CAVIN1 FAM133DP GALNT5 CDK7P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FAM133DP on UCSC Golden Path with GeneCards custom track

Genomic Locations for FAM133DP Gene

Genomic Locations for FAM133DP Gene
chr2:157,378,487-157,380,509
(GRCh38/hg38)
Size:
2,023 bases
Orientation:
Minus strand
chr2:158,234,999-158,237,021
(GRCh37/hg19)

Genomic View for FAM133DP Gene

Genes around FAM133DP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM133DP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM133DP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM133DP Gene

Proteins for FAM133DP Gene

Post-translational modifications for FAM133DP Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM133DP Gene

Domains & Families for FAM133DP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM133DP Gene

Function for FAM133DP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM133DP Gene

Localization for FAM133DP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM133DP Gene

Pathways & Interactions for FAM133DP Gene

SuperPathways for FAM133DP Gene

No Data Available

Interacting Proteins for FAM133DP Gene

Gene Ontology (GO) - Biological Process for FAM133DP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM133DP Gene

Drugs & Compounds for FAM133DP Gene

No Compound Related Data Available

Transcripts for FAM133DP Gene

mRNA/cDNA for FAM133DP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM133DP Gene

No ASD Table

Relevant External Links for FAM133DP Gene

GeneLoc Exon Structure for
FAM133DP
ECgene alternative splicing isoforms for
FAM133DP

Expression for FAM133DP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM133DP Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM133DP Gene:

FAM133DP
genes like me logo Genes that share expression patterns with FAM133DP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM133DP Gene

Orthologs for FAM133DP Gene

Evolution for FAM133DP Gene

ENSEMBL:
Gene Tree for FAM133DP (if available)
TreeFam:
Gene Tree for FAM133DP (if available)

No data available for Orthologs for FAM133DP Gene

Paralogs for FAM133DP Gene

No data available for Paralogs for FAM133DP Gene

Variants for FAM133DP Gene

Sequence variations from dbSNP and Humsavar for FAM133DP Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000885187 -- 157,378,132(-) G/C downstream_transcript_variant
rs1001621766 -- 157,380,900(-) G/A upstream_transcript_variant
rs1001649101 -- 157,379,012(-) T/C non_coding_transcript_variant
rs1002658639 -- 157,380,654(-) T/A upstream_transcript_variant
rs1003269169 -- 157,378,547(-) A/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for FAM133DP Gene

Variant ID Type Subtype PubMed ID
nsv1011505 CNV gain 25217958
nsv2989 CNV insertion 18451855
nsv834432 CNV gain 17160897
nsv963737 CNV duplication 23825009

Additional Variant Information for FAM133DP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM133DP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM133DP Gene

Disorders for FAM133DP Gene

Additional Disease Information for FAM133DP

No disorders were found for FAM133DP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM133DP Gene

Publications for FAM133DP Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for FAM133DP Gene

Sources for FAM133DP Gene

Content
Loading form....