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Aliases for FAM106B Gene

Aliases for FAM106B Gene

  • Family With Sequence Similarity 106 Member B 2 3
  • Family With Sequence Similarity 106, Member B 2

External Ids for FAM106B Gene

Previous GeneCards Identifiers for FAM106B Gene

  • GC17P020262
  • GC17U900813
  • GC17P020320

Summaries for FAM106B Gene

GeneCards Summary for FAM106B Gene

FAM106B (Family With Sequence Similarity 106 Member B) is a Protein Coding gene.

Additional gene information for FAM106B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM106B Gene

Genomics for FAM106B Gene

GeneHancer (GH) Regulatory Elements for FAM106B Gene

Promoters and enhancers for FAM106B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I021208 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 5.5 +795.4 795446 7.6 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 ZNF207 ZNF143 TMEM11 ENSG00000235530 DHRS7B FAM106B NATD1 GC17M021160
GH17I021198 Enhancer 1.1 Ensembl ENCODE dbSUPER 5.4 +783.2 783151 3.2 HDAC1 KLF1 TEAD4 BACH1 FOSL1 GATA3 ZNF766 ZNF316 SCRT2 RCOR1 DHRS7B TMEM11 FAM106B ENSG00000235530 GC17M021160
GH17I021160 Enhancer 1 Ensembl ENCODE dbSUPER 4.5 +745.2 745182 3.3 CTCF FOXA2 MAX YY1 FOXA1 ZNF217 CTBP1 JUND GATA3 ZSCAN5C GC17M021160 FAM106B DHRS7B ENSG00000235530
GH17I021193 Enhancer 0.9 Ensembl ENCODE dbSUPER 4.4 +777.2 777172 1.8 CTBP1 ZNF449 ZBTB48 PRDM1 TMEM11 DHRS7B FAM106B ENSG00000235530 GC17M021160
GH17I021186 Enhancer 0.9 Ensembl ENCODE dbSUPER 4.3 +769.3 769291 1 POLR2A MAX REST NR2F2 TMEM11 FAM106B GC17M021160 ENSG00000235530 DHRS7B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FAM106B on UCSC Golden Path with GeneCards custom track

Genomic Locations for FAM106B Gene

Genomic Locations for FAM106B Gene
chr17:20,417,292-20,419,050
(GRCh38/hg38)
Size:
1,759 bases
Orientation:
Plus strand
chr17:20,320,741-20,322,363
(GRCh37/hg19)

Genomic View for FAM106B Gene

Genes around FAM106B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM106B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM106B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM106B Gene

Proteins for FAM106B Gene

Post-translational modifications for FAM106B Gene

No Post-translational modifications

Other Protein References for FAM106B Gene

REFSEQ proteins:

No data available for DME Specific Peptides for FAM106B Gene

Domains & Families for FAM106B Gene

Suggested Antigen Peptide Sequences for FAM106B Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FAM106B Gene

Function for FAM106B Gene

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM106B Gene

Localization for FAM106B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM106B Gene

Pathways & Interactions for FAM106B Gene

SuperPathways for FAM106B Gene

No Data Available

Interacting Proteins for FAM106B Gene

Gene Ontology (GO) - Biological Process for FAM106B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM106B Gene

Drugs & Compounds for FAM106B Gene

No Compound Related Data Available

Transcripts for FAM106B Gene

mRNA/cDNA for FAM106B Gene

(1) REFSEQ mRNAs :

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM106B Gene

No ASD Table

Relevant External Links for FAM106B Gene

GeneLoc Exon Structure for
FAM106B
ECgene alternative splicing isoforms for
FAM106B

Expression for FAM106B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM106B Gene

mRNA expression in normal human tissues for FAM106B Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM106B Gene:

FAM106B
genes like me logo Genes that share expression patterns with FAM106B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM106B Gene

Orthologs for FAM106B Gene

No data available for Orthologs and Evolution for FAM106B Gene

Paralogs for FAM106B Gene

(2) SIMAP similar genes for FAM106B Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM106B: view

No data available for Paralogs for FAM106B Gene

Variants for FAM106B Gene

Sequence variations from dbSNP and Humsavar for FAM106B Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1002476303 -- 20,415,628(+) T/C upstream_transcript_variant
rs1005823737 -- 20,416,290(+) G/A upstream_transcript_variant
rs1006291998 -- 20,415,992(+) G/A upstream_transcript_variant
rs1007283430 -- 20,416,668(+) C/T upstream_transcript_variant
rs1007334501 -- 20,416,421(+) A/G upstream_transcript_variant

Additional Variant Information for FAM106B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM106B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM106B Gene

Disorders for FAM106B Gene

Additional Disease Information for FAM106B

No disorders were found for FAM106B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM106B Gene

Publications for FAM106B Gene

  1. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody MC … Nusbaum C (Nature 2006) 3 58
  2. Reciprocal crossovers and a positional preference for strand exchange in recombination events resulting in deletion or duplication of chromosome 17p11.2. (PMID: 14639526) Bi W … Lupski JR (American journal of human genetics 2003) 3 58
  3. Structure and evolution of the Smith-Magenis syndrome repeat gene clusters, SMS-REPs. (PMID: 11997339) Park SS … Lupski JR (Genome research 2002) 3 58

Products for FAM106B Gene

Sources for FAM106B Gene

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