Aliases for FABP3P2 Gene

Aliases for FABP3P2 Gene

  • Fatty Acid Binding Protein 3 Pseudogene 2 2 3 5
  • FABP3-Ps 3
  • FABP3P 3

External Ids for FABP3P2 Gene

Previous GeneCards Identifiers for FABP3P2 Gene

  • GC13U990059
  • GC13M041879
  • GC13M040741
  • GC13M041841
  • GC13M042943
  • GC13M023746

Summaries for FABP3P2 Gene

GeneCards Summary for FABP3P2 Gene

FABP3P2 (Fatty Acid Binding Protein 3 Pseudogene 2) is a Pseudogene.

Additional gene information for FABP3P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for FABP3P2 Gene

Genomics for FABP3P2 Gene

GeneHancer (GH) Regulatory Elements for FABP3P2 Gene

Promoters and enhancers for FABP3P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J042368 Enhancer 0.9 Ensembl ENCODE dbSUPER 500.7 +0.4 370 0.8 CBFB BATF IRF4 EBF1 STAT5A ATF2 JUNB NFATC1 MTA3 BCL3 FABP3P2 LINC02341
GH13J042367 Enhancer 0.8 FANTOM5 Ensembl dbSUPER 500.7 +1.6 1556 0.8 CEBPG SPI1 ATF4 CEBPB ATF3 FABP3P2 AKAP11 TNFSF11 LINC02341
GH13J042377 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -9.4 -9444 4.4 RXRA ZBTB40 SIN3A SP1 EP300 JUND RELA MEF2C RCOR1 REST TNFSF11 AKAP11 DGKH FABP3P2 lnc-VWA8-7 LINC02341
GH13J042354 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.7 14656 3.8 CTCF ZIC2 RAD21 SMC3 BATF MYC IRF4 POU2F2 STAT5A STAT1 TNFSF11 AKAP11 DGKH VWA8 FABP3P2 LINC02341
GH13J042391 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -24.9 -24918 5.8 CLOCK POLR2A CBFB FOS USF1 FOSL1 POU2F2 PKNOX1 EBF1 IKZF1 TNFSF11 AKAP11 DGKH lnc-VWA8-7 FABP3P2 LINC02341
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around FABP3P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FABP3P2 Gene

Genomic Locations for FABP3P2 Gene
chr13:42,369,114-42,369,757
(GRCh38/hg38)
Size:
644 bases
Orientation:
Minus strand
chr13:42,943,250-42,943,893
(GRCh37/hg19)
Size:
644 bases
Orientation:
Minus strand

Genomic View for FABP3P2 Gene

Genes around FABP3P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FABP3P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FABP3P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FABP3P2 Gene

Proteins for FABP3P2 Gene

Post-translational modifications for FABP3P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FABP3P2 Gene

Domains & Families for FABP3P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for FABP3P2 Gene

Function for FABP3P2 Gene

Phenotypes From GWAS Catalog for FABP3P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FABP3P2 Gene

Localization for FABP3P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FABP3P2 Gene

Pathways & Interactions for FABP3P2 Gene

PathCards logo

SuperPathways for FABP3P2 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for FABP3P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for FABP3P2 Gene

Drugs & Compounds for FABP3P2 Gene

No Compound Related Data Available

Transcripts for FABP3P2 Gene

mRNA/cDNA for FABP3P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for FABP3P2 Gene

No ASD Table

Relevant External Links for FABP3P2 Gene

GeneLoc Exon Structure for
FABP3P2

Expression for FABP3P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FABP3P2 Gene

genes like me logo Genes that share expression patterns with FABP3P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FABP3P2 Gene

Orthologs for FABP3P2 Gene

Evolution for FABP3P2 Gene

ENSEMBL:
Gene Tree for FABP3P2 (if available)
TreeFam:
Gene Tree for FABP3P2 (if available)

No data available for Orthologs for FABP3P2 Gene

Paralogs for FABP3P2 Gene

No data available for Paralogs for FABP3P2 Gene

Variants for FABP3P2 Gene

Additional Variant Information for FABP3P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FABP3P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FABP3P2 Gene

Disorders for FABP3P2 Gene

Additional Disease Information for FABP3P2

Genetic Association Database
(GAD)

No disorders were found for FABP3P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FABP3P2 Gene

Publications for FABP3P2 Gene

  1. Identification of a human heart FABP pseudogene located on chromosome 13. (PMID: 9256083) Prinsen CF … Veerkamp JH (Gene 1997) 2 3 23 54
  2. Genome-wide association study using extreme truncate selection identifies novel genes affecting bone mineral density and fracture risk. (PMID: 21533022) Duncan EL … Brown MA (PLoS genetics 2011) 41 54
  3. Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci. (PMID: 21102463) Franke A … Parkes M (Nature genetics 2010) 41 54
  4. Genome-wide association meta-analysis of cortical bone mineral density unravels allelic heterogeneity at the RANKL locus and potential pleiotropic effects on bone. (PMID: 21124946) Paternoster L … Ohlsson C (PLoS genetics 2010) 41 54
  5. New sequence variants associated with bone mineral density. (PMID: 19079262) Styrkarsdottir U … Stefansson K (Nature genetics 2009) 41 54

Products for FABP3P2 Gene

Sources for FABP3P2 Gene