Aliases for ETV7-AS1 Gene

Subcategory (RNA class) for ETV7-AS1 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ETV7-AS1 Gene

  • ETV7 And PTX1 Antisense RNA 1 2 3 5
  • ETV7-AS1 2 5
  • NONHSAG043669.2 91
  • HSALNG0049748 164

External Ids for ETV7-AS1 Gene

Previous GeneCards Identifiers for ETV7-AS1 Gene

  • GC06P043455
  • GC06P046151

Summaries for ETV7-AS1 Gene

GeneCards Summary for ETV7-AS1 Gene

ETV7-AS1 (ETV7 And PTX1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ETV7-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ETV7-AS1 Gene

Genomics for ETV7-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ETV7-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J036386 Promoter/Enhancer 1.3 EPDnew Ensembl ENCODE 600.7 +0.4 385 2.8 CTCF EZH2 EED RUNX3 GATAD2B CBX2 NFIC IKZF1 NR2F1 IRF2 ETV7 ETV7-AS1 KCTD20 BNIP5 MAPK13 PNPLA1
GH06J036439 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.6 +56.0 56016 6.9 SP1 HNRNPL CREB1 GATAD2A CTCF ATF7 PRDM10 ZNF629 TFE3 ZNF512 KCTD20 PXT1 lnc-PNPLA1-1 ETV7 CMTR1 SRSF3 BRPF3 TEAD3 ETV7-AS1 RNF8
GH06J036422 Promoter/Enhancer 1.8 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 12.1 +36.7 36699 2 ZNF221 GATAD2A CTCF TEAD4 PRDM10 REST ZNF629 TFE3 IKZF1 NFKBIZ ETV7 MAPK13 KCTD20 ETV7-AS1 BNIP5 STK38 PI16 PXT1 SRSF3 CDKN1A
GH06J036357 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 11.4 -28.3 -28303 1.4 SP1 PRDM10 ZNF512 BACH1 LARP7 STAT3 RELA TCF12 IKZF2 RCOR1 BNIP5 ETV7 ETV7-AS1 FGD2 MAPK13 KCTD20 PXT1 PNPLA1 CPNE5 piR-33422-364
GH06J036427 Enhancer 1.2 Ensembl ENCODE dbSUPER 11.1 +41.3 41256 1 LEF1 IKZF1 JUND MTA2 PKNOX1 ZNF24 NR2C1 BRD9 DPF2 HDAC1 ETV7 ETV7-AS1 STK38 RNF8 PI16 KCTD20 PXT1 piR-57461-206 RF00017-5485
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ETV7-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ETV7-AS1 Gene

Genomic Locations for ETV7-AS1 Gene
chr6:36,386,831-36,393,462
(GRCh38/hg38)
Size:
6,632 bases
Orientation:
Plus strand
chr6:36,354,608-36,359,771
(GRCh37/hg19)
Size:
5,164 bases
Orientation:
Plus strand

Genomic View for ETV7-AS1 Gene

Genes around ETV7-AS1 on UCSC Golden Path with GeneCards custom track
ETV7-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ETV7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ETV7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ETV7-AS1 Gene

Proteins for ETV7-AS1 Gene

Post-translational modifications for ETV7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ETV7-AS1 Gene

Domains & Families for ETV7-AS1 Gene

Gene Families for ETV7-AS1 Gene

genes like me logo Genes that share domains with ETV7-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ETV7-AS1 Gene

Function for ETV7-AS1 Gene

Phenotypes From GWAS Catalog for ETV7-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ETV7-AS1 Gene

Localization for ETV7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ETV7-AS1 Gene

Pathways & Interactions for ETV7-AS1 Gene

PathCards logo

SuperPathways for ETV7-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ETV7-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ETV7-AS1 Gene

Drugs & Compounds for ETV7-AS1 Gene

No Compound Related Data Available

Transcripts for ETV7-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ETV7-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000290517_9606 lncRNA 319 4

HGNC: 40833,

Ensembl: ENST00000411643 (view in UCSC) ,

LncBook: HSALNT0105581,

NONCODE: NONHSAT112214.2,

URS0000A7E5C2_9606 lncRNA 60 1

Ensembl: ENST00000612718 (view in UCSC) ,

URS00008BDFBF_9606 lncRNA 455 2

LncBook: HSALNT0105584,

NONCODE: NONHSAT112215.2,

URS00009C35FF_9606 lncRNA 366 2

LncBook: HSALNT0105583,

NONCODE: NONHSAT207196.1,

URS00009B4C44_9606 lncRNA 319 2

LncBook: HSALNT0105582,

NONCODE: NONHSAT207195.1,

ETV7-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ETV7-AS1 Gene

No ASD Table

Relevant External Links for ETV7-AS1 Gene

GeneLoc Exon Structure for
ETV7-AS1

No data available for mRNA/cDNA for ETV7-AS1 Gene

Expression for ETV7-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ETV7-AS1 Gene

Orthologs for ETV7-AS1 Gene

Evolution for ETV7-AS1 Gene

ENSEMBL:
Gene Tree for ETV7-AS1 (if available)
TreeFam:
Gene Tree for ETV7-AS1 (if available)

No data available for Orthologs for ETV7-AS1 Gene

Paralogs for ETV7-AS1 Gene

No data available for Paralogs for ETV7-AS1 Gene

Variants for ETV7-AS1 Gene

Additional dbSNP identifiers (rs#s) for ETV7-AS1 Gene

Additional Variant Information for ETV7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ETV7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ETV7-AS1 Gene

Disorders for ETV7-AS1 Gene

Additional Disease Information for ETV7-AS1

No disorders were found for ETV7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ETV7-AS1 Gene

Publications for ETV7-AS1 Gene

No publications were found for ETV7-AS1 Gene.

No data available for Mastermind for ETV7-AS1 Gene

Products for ETV7-AS1 Gene

Sources for ETV7-AS1 Gene