Aliases for ETV5-AS1 Gene

Subcategory (RNA class) for ETV5-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ETV5-AS1 Gene

  • ETV5 Antisense RNA 1 2 3 5
  • ETV5 Antisense RNA 1 (Non-Protein Coding) 2 3
  • ETV5-AS1 2 168
  • HSALNG0031352 167
  • NONHSAG036899 92

External Ids for ETV5-AS1 Gene

Previous GeneCards Identifiers for ETV5-AS1 Gene

  • GC00U933196
  • GC03P185797

Summaries for ETV5-AS1 Gene

GeneCards Summary for ETV5-AS1 Gene

ETV5-AS1 (ETV5 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ETV5-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ETV5-AS1 Gene

Genomics for ETV5-AS1 Gene

GeneHancer (GH) Regulatory Elements for ETV5-AS1 Gene

Promoters and enhancers for ETV5-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J186079 Enhancer 0.9 Ensembl ENCODE dbSUPER 500.7 +1.3 1331 4.2 CEBPB ZNF316 ETS1 BATF JUNB HLF CEBPG EGR2 NANOG MTA2 ETV5-AS1 ETV5 lnc-DNAJB11-12 lnc-DGKG-1
GH03J185958 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.1 -118.2 -118219 4.9 ZSCAN5C POLR2G NCOR1 PHF8 ZNF639 POLR2A KDM6A EP300 TEAD1 ATF2 NMRAL2P lnc-SENP2-10 TRA2B ETV5 ETV5-AS1 AHSG RF00017-4199
GH03J186241 Promoter/Enhancer 1.3 Ensembl ENCODE 10.1 +163.1 163139 1.4 CTCF NRF1 POLR2G FOS ZBTB11 REST ZBTB25 MYC TGIF2 RAD21 ETV5 TRA2B ETV5-AS1 AHSG lnc-ETV5-2 lnc-DNAJB11-4 DGKG
GH03J186044 Enhancer 1.1 Ensembl ENCODE dbSUPER 11.3 -34.1 -34051 1.8 POLR2G NCOR1 TCF7 SKI TEAD1 FOXA2 POLR2A SAP130 RBM22 FOXP1 ETV5-AS1 ETV5 HRG piR-31508-039 piR-31109-003
GH03J186121 Enhancer 1.1 FANTOM5 Ensembl ENCODE 11.1 +44.3 44299 4 EP300 TEAD4 SP1 GATAD2B POLR2A ZBTB17 MLLT1 NR3C1 TCF12 ZFHX2 LOC105374257 ETV5-AS1 lnc-ETV5-1 lnc-DGKG-1 DGKG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ETV5-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ETV5-AS1 Gene

Genomic Locations for ETV5-AS1 Gene
chr3:186,079,170-186,080,948
(GRCh38/hg38)
Size:
1,779 bases
Orientation:
Plus strand
chr3:185,796,959-185,798,736
(GRCh37/hg19)
Size:
1,778 bases
Orientation:
Plus strand

Genomic View for ETV5-AS1 Gene

Genes around ETV5-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ETV5-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ETV5-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ETV5-AS1 Gene

Proteins for ETV5-AS1 Gene

Post-translational modifications for ETV5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ETV5-AS1 Gene

Domains & Families for ETV5-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ETV5-AS1 Gene

Function for ETV5-AS1 Gene

Phenotypes From GWAS Catalog for ETV5-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ETV5-AS1 Gene

Localization for ETV5-AS1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ETV5-AS1 gene
Compartment Confidence
endoplasmic reticulum 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ETV5-AS1 Gene

Pathways & Interactions for ETV5-AS1 Gene

PathCards logo

SuperPathways for ETV5-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ETV5-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ETV5-AS1 Gene

Drugs & Compounds for ETV5-AS1 Gene

No Compound Related Data Available

Transcripts for ETV5-AS1 Gene

mRNA/cDNA for ETV5-AS1 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :
1 LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ETV5-AS1 Gene

No ASD Table

Relevant External Links for ETV5-AS1 Gene

GeneLoc Exon Structure for
ETV5-AS1

Expression for ETV5-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ETV5-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ETV5-AS1 Gene

This gene is overexpressed in Pancreas (x5.4).
genes like me logo Genes that share expression patterns with ETV5-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ETV5-AS1 Gene

Orthologs for ETV5-AS1 Gene

Evolution for ETV5-AS1 Gene

ENSEMBL:
Gene Tree for ETV5-AS1 (if available)
TreeFam:
Gene Tree for ETV5-AS1 (if available)

No data available for Orthologs for ETV5-AS1 Gene

Paralogs for ETV5-AS1 Gene

No data available for Paralogs for ETV5-AS1 Gene

Variants for ETV5-AS1 Gene

Additional Variant Information for ETV5-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ETV5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ETV5-AS1 Gene

Disorders for ETV5-AS1 Gene

No disorders were found for ETV5-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ETV5-AS1 Gene

Publications for ETV5-AS1 Gene

No publications were found for ETV5-AS1 Gene.

Products for ETV5-AS1 Gene

Sources for ETV5-AS1 Gene