ETS1-AS1 Gene (RNA Gene)

ETS1 Antisense RNA 1

GC11P128527
GIFtS:
11

Aliases for ETS1-AS1 Gene

Subcategory (RNA class) for ETS1-AS1 Gene

lncRNA

Quality Score for this RNA gene is

16

Aliases for ETS1-AS1 Gene

  • ETS1 Antisense RNA 1 2 3 5
  • Ets-1 Promoter-Associated Noncoding RNA 2 3
  • NONHSAG010015 94
  • HSALNG0088103 169
  • Lnc-FLI1-2 170
  • PancEts-1 3
  • ETS1-AS1 2

External Ids for ETS1-AS1 Gene

Summaries for ETS1-AS1 Gene

GeneCards Summary for ETS1-AS1 Gene

ETS1-AS1 (ETS1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with ETS1-AS1 include Neuroblastoma 1.

Additional gene information for ETS1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ETS1-AS1 Gene

Genomics for ETS1-AS1 Gene

GeneHancer (GH) Regulatory Elements for ETS1-AS1 Gene

Promoters and enhancers for ETS1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J128527 Enhancer 0.4 ENCODE dbSUPER 750.6 +1.8 1801 0.7 PRDM1 ETS1-AS1 LOC105369565 ETS1
GH11J128461 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.4 -31.8 -31759 65 ZNF24 SP1 CTCF FOXA1 POLR2A USF2 JUND MYC ETV6 RELA ETS1 ETS1-AS1 FLI1 MIR6090 lnc-FLI1-5
GH11J128620 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.6 +99.8 99795 10.8 CTCF ETV6 RELA MAX RAD21 TEAD4 SP1 CBFA2T2 MLLT1 ZNF687 FLI1 ETS1 SENCR ETS1-AS1 LOC105369568 ENSG00000245008
GH11J128607 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.4 +84.9 84926 6.8 SP1 ETV6 POLR2A MLLT1 ZNF687 CREM RELA IKZF1 BACH1 IKZF2 ETS1-AS1 ETS1 FLI1 LOC105369568 ENSG00000245008
GH11J128288 Enhancer 1.4 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 11 -228.1 -228128 18.3 ZNF24 SP1 CTCF RBPJ MYC ETV6 RELA CEBPB MAX RAD21 ETS1 FLI1 ETS1-AS1 SENCR lnc-ETS1-8 lnc-FLI1-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ETS1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ETS1-AS1 Gene

Genomic Locations for ETS1-AS1 Gene
chr11:128,526,142-128,530,389
(GRCh38/hg38)
Size:
4,248 bases
Orientation:
Plus strand
chr11:128,396,037-128,400,284
(GRCh37/hg19)
Size:
4,248 bases
Orientation:
Plus strand

Genomic View for ETS1-AS1 Gene

Genes around ETS1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ETS1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ETS1-AS1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for ETS1-AS1 Gene

Proteins for ETS1-AS1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ETS1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ETS1-AS1 Gene

Domains & Families for ETS1-AS1 Gene

Gene Families for ETS1-AS1 Gene

HGNC:
genes like me logo Genes that share domains with ETS1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ETS1-AS1 Gene

Function for ETS1-AS1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ETS1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ETS1-AS1 Gene

Localization for ETS1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ETS1-AS1 Gene

Pathways & Interactions for ETS1-AS1 Gene

PathCards logo

SuperPathways for ETS1-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ETS1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ETS1-AS1 Gene

Drugs & Compounds for ETS1-AS1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ETS1-AS1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ETS1-AS1 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNACentral transcripts :
(1) ENA transcripts :
(2) LNCipedia transcripts :
(1) NONCODE transcripts :
(1) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ETS1-AS1 Gene

No ASD Table

Relevant External Links for ETS1-AS1 Gene

GeneLoc Exon Structure for
ETS1-AS1
ECgene alternative splicing isoforms for
ETS1-AS1

Expression for ETS1-AS1 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ETS1-AS1 Gene

Orthologs for ETS1-AS1 Gene

Evolution for ETS1-AS1 Gene

ENSEMBL:
Gene Tree for ETS1-AS1 (if available)
TreeFam:
Gene Tree for ETS1-AS1 (if available)

No data available for Orthologs for ETS1-AS1 Gene

Paralogs for ETS1-AS1 Gene

No data available for Paralogs for ETS1-AS1 Gene

Variants for ETS1-AS1 Gene

Sequence variations from dbSNP and Humsavar for ETS1-AS1 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000346614 -- 128,529,624(+) G/A intron_variant
rs1000520168 -- 128,526,569(+) C/T non_coding_transcript_variant
rs1000735155 -- 128,524,183(+) A/G upstream_transcript_variant
rs1001784740 -- 128,528,214(+) T/C intron_variant
rs1002008596 -- 128,529,999(+) C/A intron_variant

Additional Variant Information for ETS1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ETS1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ETS1-AS1 Gene

Disorders for ETS1-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ETS1-AS1 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
neuroblastoma 1
  • neuroblastoma, susceptibility to, 1
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for ETS1-AS1

ATLAS of Genetics and Cytogenetics in Oncology and Haematology
genes like me logo Genes that share disorders with ETS1-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ETS1-AS1 Gene

Publications for ETS1-AS1 Gene

  1. Ets-1 promoter-associated noncoding RNA regulates the NONO/ERG/Ets-1 axis to drive gastric cancer progression. (PMID: 29773901) Li D … Tong Q (Oncogene 2018) 2 3 56
  2. Long Noncoding RNA pancEts-1 Promotes Neuroblastoma Progression through hnRNPK-Mediated β-Catenin Stabilization. (PMID: 29311158) Li D … Tong Q (Cancer research 2018) 3 56

ExternalLinks

View latest publications for ETS1-AS1 gene in Mastermind

Products for ETS1-AS1 Gene

Sources for ETS1-AS1 Gene