Aliases for ERVMER61-1 Gene

Aliases for ERVMER61-1 Gene

  • Endogenous Retrovirus Group MER61 Member 1 2 3 5
  • Endogenous Retrovirus Group MER61, Member 1 2
  • Chromosome 1 Open Reading Frame 99 2
  • NONHSAG003754 92
  • NONHSAG003756 92
  • NONHSAG003753 92
  • HSALNG0009117 167
  • NONHSAG003758 92
  • HSALNG0009131 167
  • LINC01036 168
  • LINC01037 2
  • C1orf99 3

External Ids for ERVMER61-1 Gene

Previous HGNC Symbols for ERVMER61-1 Gene

  • C1orf99

Previous GeneCards Identifiers for ERVMER61-1 Gene

  • GC01P187612
  • GC01P187642

Summaries for ERVMER61-1 Gene

GeneCards Summary for ERVMER61-1 Gene

ERVMER61-1 (Endogenous Retrovirus Group MER61 Member 1) is an Uncategorized gene.

Additional gene information for ERVMER61-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ERVMER61-1 Gene

Genomics for ERVMER61-1 Gene

GeneHancer (GH) Regulatory Elements for ERVMER61-1 Gene

Promoters and enhancers for ERVMER61-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J187069 Enhancer 0.3 Ensembl 500.7 -0.5 -499 0.8 FOS STAT3 ERVMER61-1 LINC01036 lnc-PTGS2-3
GH01J187072 Promoter 0.9 Ensembl 0.7 +2.4 2401 1.8 NFRKB POLR2G GTF2A2 POLR2H PBX2 ZNF335 SUPT5H RB1 TFDP1 NFATC3 piR-33303-010 ERVMER61-1 LINC01036 piR-48553-027
GH01J187038 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 -31.6 -31565 0.9 ZNF217 JUND CTBP1 FOS CEBPB JUN GATA3 FOXA1 EP300 DPF2 lnc-PTGS2-3 ERVMER61-1 LINC01036
GH01J187050 Enhancer 0.6 dbSUPER 0.4 -18.7 -18726 2 CTCF REST MEF2C RAD21 TRIM22 SMC3 ZNF384 ZNF263 ZNF654 RFX5 LINC01036 ERVMER61-1 lnc-PTGS2-3
GH01J187053 Enhancer 0.5 Ensembl 0.4 -16.3 -16299 1.2 ZNF217 CTBP1 NR3C1 NFE2 ELF1 DPF2 MAFG NFE2L2 GATA3 LINC01036 ERVMER61-1 lnc-PTGS2-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ERVMER61-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ERVMER61-1 Gene

Genomic Locations for ERVMER61-1 Gene
chr1:187,070,700-187,686,628
(GRCh38/hg38)
Size:
615,929 bases
Orientation:
Plus strand
chr1:187,610,358-187,612,992
(GRCh37/hg19)
Size:
2,635 bases
Orientation:
Plus strand

Genomic View for ERVMER61-1 Gene

Genes around ERVMER61-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ERVMER61-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ERVMER61-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ERVMER61-1 Gene

Proteins for ERVMER61-1 Gene

Post-translational modifications for ERVMER61-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ERVMER61-1 Gene

Domains & Families for ERVMER61-1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ERVMER61-1 Gene

Function for ERVMER61-1 Gene

Phenotypes From GWAS Catalog for ERVMER61-1 Gene

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ERVMER61-1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ERVMER61-1 Gene

Localization for ERVMER61-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ERVMER61-1 Gene

Pathways & Interactions for ERVMER61-1 Gene

PathCards logo

SuperPathways for ERVMER61-1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ERVMER61-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ERVMER61-1 Gene

Drugs & Compounds for ERVMER61-1 Gene

No Compound Related Data Available

Transcripts for ERVMER61-1 Gene

mRNA/cDNA for ERVMER61-1 Gene

2 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
17 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
33 RNACentral transcripts :
14 NONCODE transcripts :
11 LncBook transcripts :
22 LNCipedia transcripts :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ERVMER61-1

Alternative Splicing Database (ASD) splice patterns (SP) for ERVMER61-1 Gene

No ASD Table

Relevant External Links for ERVMER61-1 Gene

GeneLoc Exon Structure for
ERVMER61-1

Expression for ERVMER61-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ERVMER61-1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ERVMER61-1

genes like me logo Genes that share expression patterns with ERVMER61-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ERVMER61-1 Gene

Orthologs for ERVMER61-1 Gene

Evolution for ERVMER61-1 Gene

ENSEMBL:
Gene Tree for ERVMER61-1 (if available)
TreeFam:
Gene Tree for ERVMER61-1 (if available)

No data available for Orthologs for ERVMER61-1 Gene

Paralogs for ERVMER61-1 Gene

No data available for Paralogs for ERVMER61-1 Gene

Variants for ERVMER61-1 Gene

Additional Variant Information for ERVMER61-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ERVMER61-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ERVMER61-1 Gene

Disorders for ERVMER61-1 Gene

Additional Disease Information for ERVMER61-1

No disorders were found for ERVMER61-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ERVMER61-1 Gene

Publications for ERVMER61-1 Gene

  1. A revised nomenclature for transcribed human endogenous retroviral loci. (PMID: 21542922) Mayer J … Seal RL (Mobile DNA 2011) 2 3 54
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 3 54
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 54
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for ERVMER61-1 Gene

Sources for ERVMER61-1 Gene