Aliases for ERVK-28 Gene

Aliases for ERVK-28 Gene

  • Endogenous Retrovirus Group K Member 28 2 3 5
  • Endogenous Retrovirus Group K, Member 28 2
  • NONHSAG025375.2 91
  • Lnc-UQCRFS1-10 165
  • ERVK-28 5

External Ids for ERVK-28 Gene

Previous GeneCards Identifiers for ERVK-28 Gene

  • GC00U935249
  • GC19M027640
  • GC19M027641
  • GC19M027644

Summaries for ERVK-28 Gene

GeneCards Summary for ERVK-28 Gene

ERVK-28 (Endogenous Retrovirus Group K Member 28) is an Uncategorized gene.

Additional gene information for ERVK-28 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ERVK-28 Gene

Genomics for ERVK-28 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ERVK-28 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J027643 Promoter 0.3 Ensembl 600.7 +1.5 1482 3.2 ERVK-28 piR-51325-006 ENSG00000261770 LINC00662
GH19J027671 Enhancer 0.2 FANTOM5 0.3 -25.0 -25010 0.3 ENSG00000261770 LOC105372345 ERVK-28 LINC00662
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ERVK-28 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ERVK-28 Gene

Genomic Locations for ERVK-28 Gene
chr19:27,638,483-27,646,483
(GRCh38/hg38)
Size:
8,001 bases
Orientation:
Minus strand

Genomic View for ERVK-28 Gene

Genes around ERVK-28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ERVK-28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ERVK-28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ERVK-28 Gene

Proteins for ERVK-28 Gene

Post-translational modifications for ERVK-28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ERVK-28 Gene

Domains & Families for ERVK-28 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ERVK-28 Gene

Function for ERVK-28 Gene

Phenotypes From GWAS Catalog for ERVK-28 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ERVK-28 Gene

Localization for ERVK-28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ERVK-28 Gene

Pathways & Interactions for ERVK-28 Gene

PathCards logo

SuperPathways for ERVK-28 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ERVK-28 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ERVK-28 Gene

Drugs & Compounds for ERVK-28 Gene

No Compound Related Data Available

Transcripts for ERVK-28 Gene

mRNA/cDNA for ERVK-28 Gene

1 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
5 RNACentral transcripts :
2 NONCODE transcripts :
1 ENA transcripts :
4 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ERVK-28 Gene

No ASD Table

Relevant External Links for ERVK-28 Gene

GeneLoc Exon Structure for
ERVK-28

Expression for ERVK-28 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ERVK-28 Gene

Orthologs for ERVK-28 Gene

Evolution for ERVK-28 Gene

ENSEMBL:
Gene Tree for ERVK-28 (if available)
TreeFam:
Gene Tree for ERVK-28 (if available)

No data available for Orthologs for ERVK-28 Gene

Paralogs for ERVK-28 Gene

No data available for Paralogs for ERVK-28 Gene

Variants for ERVK-28 Gene

Additional Variant Information for ERVK-28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ERVK-28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ERVK-28 Gene

Disorders for ERVK-28 Gene

Additional Disease Information for ERVK-28

No disorders were found for ERVK-28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ERVK-28 Gene

Publications for ERVK-28 Gene

  1. Transcriptional profiling of human endogenous retrovirus group HERV-K(HML-2) loci in melanoma. (PMID: 23338945) Schmitt K … Mayer J (Genome biology and evolution 2013) 2 3

Products for ERVK-28 Gene

Sources for ERVK-28 Gene