Aliases for ERVFRD-3 Gene

Aliases for ERVFRD-3 Gene

  • Endogenous Retrovirus Group FRD Member 3 2 3 5
  • Endogenous Retrovirus Group FRD, Member 1 Pseudogene 3
  • Endogenous Retrovirus Group FRD, Member 3 2

External Ids for ERVFRD-3 Gene

Summaries for ERVFRD-3 Gene

GeneCards Summary for ERVFRD-3 Gene

ERVFRD-3 (Endogenous Retrovirus Group FRD Member 3) is an Uncategorized gene.

Additional gene information for ERVFRD-3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ERVFRD-3 Gene

Genomics for ERVFRD-3 Gene

GeneHancer (GH) Regulatory Elements for ERVFRD-3 Gene

Promoters and enhancers for ERVFRD-3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J021989 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 12.1 +63.7 63722 7.2 CTCF POLR2A TCF7L2 CTBP1 HCFC1 NKRF ZSCAN21 ZNF687 PRDM1 CREM CDKN2A CDKN2B-AS1 DQ485453 lnc-CDKN2B-2-001 lnc-CDKN2B-2-002 ENSG00000265194 CDKN2A-DT CDKN2B ERVFRD-3 MTAP
GH09J022910 Enhancer 0.3 Ensembl 6.4 +982.3 982346 2 USF1 ENSG00000224549 ERVFRD-3 LOC105375990 piR-38537-060 ENSG00000284418
GH09J021919 Enhancer 0.8 Ensembl ENCODE 0.4 -9.4 -9382 1.9 POLR2A ELF3 ZNF384 SP7 CEBPB ZNF239 EP300 ZBTB17 STAT1 STAT3 MTAP ERVFRD-3 lnc-IFNA1-5 ENSG00000264545
GH09J021931 Enhancer 0.4 Ensembl ENCODE 0.6 +3.2 3246 3.8 JUND piR-42649 MTAP ERVFRD-3 NONHSAG051896.2 lnc-IFNA1-5 ENSG00000264545
GH09J021921 Enhancer 0.2 Ensembl 0.4 -7.5 -7454 0.4 ERVFRD-3 lnc-IFNA1-5 ENSG00000264545 MTAP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ERVFRD-3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ERVFRD-3 Gene

Genomic Locations for ERVFRD-3 Gene
chr9:21,929,455-21,931,073
(GRCh38/hg38)
Size:
1,619 bases
Orientation:
Plus strand
chr9:21,929,454-21,931,072
(GRCh37/hg19)
Size:
1,619 bases
Orientation:
Plus strand

Genomic View for ERVFRD-3 Gene

Genes around ERVFRD-3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ERVFRD-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ERVFRD-3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ERVFRD-3 Gene

Proteins for ERVFRD-3 Gene

Post-translational modifications for ERVFRD-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ERVFRD-3 Gene

Domains & Families for ERVFRD-3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ERVFRD-3 Gene

Function for ERVFRD-3 Gene

Phenotypes From GWAS Catalog for ERVFRD-3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ERVFRD-3 Gene

Localization for ERVFRD-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ERVFRD-3 Gene

Pathways & Interactions for ERVFRD-3 Gene

PathCards logo

SuperPathways for ERVFRD-3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ERVFRD-3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ERVFRD-3 Gene

Drugs & Compounds for ERVFRD-3 Gene

No Compound Related Data Available

Transcripts for ERVFRD-3 Gene

mRNA/cDNA for ERVFRD-3 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ERVFRD-3 Gene

No ASD Table

Relevant External Links for ERVFRD-3 Gene

GeneLoc Exon Structure for
ERVFRD-3
ECgene alternative splicing isoforms for
ERVFRD-3

Expression for ERVFRD-3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ERVFRD-3 Gene

genes like me logo Genes that share expression patterns with ERVFRD-3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ERVFRD-3 Gene

Orthologs for ERVFRD-3 Gene

Evolution for ERVFRD-3 Gene

ENSEMBL:
Gene Tree for ERVFRD-3 (if available)
TreeFam:
Gene Tree for ERVFRD-3 (if available)

No data available for Orthologs for ERVFRD-3 Gene

Paralogs for ERVFRD-3 Gene

No data available for Paralogs for ERVFRD-3 Gene

Variants for ERVFRD-3 Gene

Additional Variant Information for ERVFRD-3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ERVFRD-3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ERVFRD-3 Gene

Disorders for ERVFRD-3 Gene

Additional Disease Information for ERVFRD-3

No disorders were found for ERVFRD-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ERVFRD-3 Gene

Publications for ERVFRD-3 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 56

No data available for External Links for ERVFRD-3 Gene

Products for ERVFRD-3 Gene

Sources for ERVFRD-3 Gene