Aliases for ERVE-1 Gene

Aliases for ERVE-1 Gene

  • Endogenous Retrovirus Group E Member 1 2 3 5
  • Endogenous Retroviral Sequence E, 1 2 3
  • Endogenous Retrovirus Group E, Member 1 2
  • TCONS_00025599 3
  • Lnc-IFT20-4 170
  • HERV-E1 3
  • HERVE1 3
  • ERVE1 3

External Ids for ERVE-1 Gene

Previous HGNC Symbols for ERVE-1 Gene

  • ERVE1

Previous GeneCards Identifiers for ERVE-1 Gene

  • GC17U901650

Summaries for ERVE-1 Gene

GeneCards Summary for ERVE-1 Gene

ERVE-1 (Endogenous Retrovirus Group E Member 1) is a Genetic Locus.

Additional gene information for ERVE-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ERVE-1 Gene

Genomics for ERVE-1 Gene

GeneHancer (GH) Regulatory Elements for ERVE-1 Gene

Promoters and enhancers for ERVE-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J028233 Promoter/Enhancer 1 Ensembl ENCODE 750.6 +0.8 751 3.1 CTCF RAD21 MNT NFIB ZNF652 CREB1 TRIM22 CTBP1 RFX1 DPF2 ERVE-1 PYY2 LOC105371930
GH17J028226 Promoter/Enhancer 1.2 Ensembl ENCODE 8 +7.6 7579 2.8 CTCF CTBP1 RAD21 POLR2A ZNF652 SP1 SP7 ZSCAN21 ZNF548 KLF14 LOC105371930 PYY2 lnc-IFT20-10 lnc-IFT20-12 lnc-NLK-5 piR-48491 ENSG00000264029 SUPT6H ENSG00000265041 NOS2P1
GH17J029041 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 4.1 -807.7 -807714 2.6 ZBTB6 LCORL MLX RBPJ NR2F6 CREB1 MIXL1 RAD21 POU5F1 NFIB PIPOX ENSG00000264044 TIAF1 SARM1 MYO18A SEZ6 IFT20 ERVE-1 HSALNG0115548 NDUFS5P7
GH17J028194 Enhancer 0.8 UCNEbase Ensembl 6.6 +39.4 39380 6.6 HLF SREBF1 FOSL1 CEBPB CTCF ERVE-1 PYY2 ENSG00000287721 NONHSAG021278.2 lnc-IFT20-12 NLK
GH17J028229 Enhancer 0.6 ENCODE 5.6 +5.3 5322 0.8 HLF ZNF148 MAFK EGR1 PKNOX1 ZNF629 ZNF316 ZBTB17 ZFHX2 ZNF335 LOC105371930 ERVE-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ERVE-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ERVE-1 Gene

Genomic Locations for ERVE-1 Gene
chr17:28,232,590-28,235,281
(GRCh38/hg38)
Size:
2,692 bases
Orientation:
Minus strand

Genomic View for ERVE-1 Gene

Genes around ERVE-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ERVE-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ERVE-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ERVE-1 Gene

Proteins for ERVE-1 Gene

Post-translational modifications for ERVE-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ERVE-1 Gene

Domains & Families for ERVE-1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ERVE-1 Gene

Function for ERVE-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ERVE-1 Gene

Localization for ERVE-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ERVE-1 Gene

Pathways & Interactions for ERVE-1 Gene

PathCards logo

SuperPathways for ERVE-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ERVE-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ERVE-1 Gene

Drugs & Compounds for ERVE-1 Gene

No Compound Related Data Available

Transcripts for ERVE-1 Gene

mRNA/cDNA for ERVE-1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(2) LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ERVE-1 Gene

No ASD Table

Relevant External Links for ERVE-1 Gene

GeneLoc Exon Structure for
ERVE-1
ECgene alternative splicing isoforms for
ERVE-1

Expression for ERVE-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ERVE-1 Gene

Orthologs for ERVE-1 Gene

Evolution for ERVE-1 Gene

ENSEMBL:
Gene Tree for ERVE-1 (if available)
TreeFam:
Gene Tree for ERVE-1 (if available)

No data available for Orthologs for ERVE-1 Gene

Paralogs for ERVE-1 Gene

No data available for Paralogs for ERVE-1 Gene

Variants for ERVE-1 Gene

Additional Variant Information for ERVE-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ERVE-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ERVE-1 Gene

Disorders for ERVE-1 Gene

Additional Disease Information for ERVE-1

No disorders were found for ERVE-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ERVE-1 Gene

Publications for ERVE-1 Gene

  1. A revised nomenclature for transcribed human endogenous retroviral loci. (PMID: 21542922) Mayer J … Seal RL (Mobile DNA 2011) 2 3 56
  2. Transcriptionally active HERV-K genes: identification, isolation, and chromosomal mapping. (PMID: 11401426) Sugimoto J … Jinno Y (Genomics 2001) 2 3 56
  3. Search for active endogenous retroviruses: identification and characterization of a HERV-E gene that is expressed in the pancreas and thyroid. (PMID: 11721880) Shiroma T … Kanaya F (Journal of human genetics 2001) 2 3 56
  4. DNA methylation modulates HERV-E expression in CD4+ T cells from systemic lupus erythematosus patients. (PMID: 25595738) Wu Z … Shi W (Journal of dermatological science 2015) 3 56
  5. Reactivation of codogenic endogenous retroviral (ERV) envelope genes in human endometrial carcinoma and prestages: Emergence of new molecular targets. (PMID: 23085571) Strissel PL … Strick R (Oncotarget 2012) 3 56

Products for ERVE-1 Gene

Sources for ERVE-1 Gene