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Aliases for ERICH6-AS1 Gene

Subcategory (RNA class) for ERICH6-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ERICH6-AS1 Gene

  • ERICH6 Antisense RNA 1 2 3 5

External Ids for ERICH6-AS1 Gene

Previous GeneCards Identifiers for ERICH6-AS1 Gene

  • GC03U902126

Summaries for ERICH6-AS1 Gene

GeneCards Summary for ERICH6-AS1 Gene

ERICH6-AS1 (ERICH6 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ERICH6-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ERICH6-AS1 Gene

Genomics for ERICH6-AS1 Gene

GeneHancer (GH) Regulatory Elements for ERICH6-AS1 Gene

Promoters and enhancers for ERICH6-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J150702 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 660.5 +0.1 124 2.2 HDGF PKNOX1 ARID4B NEUROD1 SIN3A YBX1 ZBTB7B BRCA1 ZNF48 YY1 ERICH6-AS1 ERICH6 EIF2A SIAH2-AS1 COMMD2
GH03J150724 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 22.3 +24.1 24087 5.6 HDGF CLOCK SMAD1 ATF1 FOXA2 ARNT TCF12 GATA2 ARID2 ZNF143 ERICH6-AS1 SIAH2 ERICH6 SIAH2-AS1 MINDY4B ENSG00000243273 SNRPCP3 LOC101928105
GH03J150598 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 10.7 -101.0 -100979 8.8 ZFP64 FEZF1 DMAP1 YBX1 YY1 ZNF213 E2F8 MEF2D ZNF610 ZNF585B SELENOT SERP1 EIF2A RPL32P9 LOC730021 COMMD2 TSC22D2 ERICH6 ERICH6-AS1
GH03J150733 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.3 +35.9 35850 12.4 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B NEUROD1 DMAP1 YY1 SLC30A9 LOC101928105 SIAH2 SIAH2-AS1 ERICH6 ERICH6-AS1 TSC22D2 SERP1 CLRN1 PIR41342
GH03J150750 Enhancer 1.1 Ensembl ENCODE dbSUPER 11.3 +48.2 48249 2.5 MEIS2 PKNOX1 CLOCK USF1 SIN3A ZMYM3 EBF1 ZNF48 ZBTB40 ZNF507 EIF2A ERICH6 ERICH6-AS1 SIAH2-AS1 SIAH2 LOC105374155 PIR41342
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ERICH6-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ERICH6-AS1 Gene

Genomic Locations for ERICH6-AS1 Gene
chr3:150,703,564-150,720,146
(GRCh38/hg38)
Size:
16,583 bases
Orientation:
Plus strand

Genomic View for ERICH6-AS1 Gene

Genes around ERICH6-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ERICH6-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ERICH6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ERICH6-AS1 Gene

Proteins for ERICH6-AS1 Gene

Post-translational modifications for ERICH6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ERICH6-AS1 Gene

Domains & Families for ERICH6-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ERICH6-AS1 Gene

Function for ERICH6-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ERICH6-AS1 Gene

Localization for ERICH6-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ERICH6-AS1 Gene

Pathways & Interactions for ERICH6-AS1 Gene

SuperPathways for ERICH6-AS1 Gene

No Data Available

Interacting Proteins for ERICH6-AS1 Gene

Gene Ontology (GO) - Biological Process for ERICH6-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ERICH6-AS1 Gene

Drugs & Compounds for ERICH6-AS1 Gene

No Compound Related Data Available

Transcripts for ERICH6-AS1 Gene

mRNA/cDNA for ERICH6-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(5) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ERICH6-AS1 Gene

No ASD Table

Relevant External Links for ERICH6-AS1 Gene

GeneLoc Exon Structure for
ERICH6-AS1
ECgene alternative splicing isoforms for
ERICH6-AS1

Expression for ERICH6-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ERICH6-AS1 Gene

genes like me logo Genes that share expression patterns with ERICH6-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ERICH6-AS1 Gene

Orthologs for ERICH6-AS1 Gene

Evolution for ERICH6-AS1 Gene

ENSEMBL:
Gene Tree for ERICH6-AS1 (if available)
TreeFam:
Gene Tree for ERICH6-AS1 (if available)

No data available for Orthologs for ERICH6-AS1 Gene

Paralogs for ERICH6-AS1 Gene

No data available for Paralogs for ERICH6-AS1 Gene

Variants for ERICH6-AS1 Gene

Sequence variations from dbSNP and Humsavar for ERICH6-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000099250 -- 150,714,919(+) C/A intron_variant
rs1000103270 -- 150,715,306(+) A/C intron_variant
rs1000170035 -- 150,716,576(+) A/G intron_variant
rs1000179469 -- 150,717,578(+) T/C intron_variant
rs1000356500 -- 150,705,206(+) A/C intron_variant

Additional Variant Information for ERICH6-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ERICH6-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ERICH6-AS1 Gene

Disorders for ERICH6-AS1 Gene

Additional Disease Information for ERICH6-AS1

No disorders were found for ERICH6-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ERICH6-AS1 Gene

Publications for ERICH6-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. cDNA microarray analysis of altered gene expression in Ara-C-treated leukemia cells. (PMID: 12951057) Takagaki K … Yano J (Biochemical and biophysical research communications 2003) 3 58

Products for ERICH6-AS1 Gene

Sources for ERICH6-AS1 Gene

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