Aliases for ENTPD1-AS1 Gene

Subcategory (RNA class) for ENTPD1-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENTPD1-AS1 Gene

  • ENTPD1 Antisense RNA 1 2 3 5
  • ENTPD1-AS1 2 168
  • Weakly Similar To Zinc Finger Protein 195 3
  • HSALNG0079854 167
  • NONHSAG006588 92
  • HSALNG0079858 167

External Ids for ENTPD1-AS1 Gene

Previous GeneCards Identifiers for ENTPD1-AS1 Gene

  • GC10M097517

Summaries for ENTPD1-AS1 Gene

GeneCards Summary for ENTPD1-AS1 Gene

ENTPD1-AS1 (ENTPD1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with ENTPD1-AS1 include Astrocytoma and Gastric Cancer.

Additional gene information for ENTPD1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENTPD1-AS1 Gene

Genomics for ENTPD1-AS1 Gene

GeneHancer (GH) Regulatory Elements for ENTPD1-AS1 Gene

Promoters and enhancers for ENTPD1-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENTPD1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENTPD1-AS1 Gene

Genomic Locations for ENTPD1-AS1 Gene
chr10:95,732,976-96,090,250
(GRCh38/hg38)
Size:
357,275 bases
Orientation:
Minus strand
chr10:97,512,963-97,849,995
(GRCh37/hg19)
Size:
337,033 bases
Orientation:
Minus strand

Genomic View for ENTPD1-AS1 Gene

Genes around ENTPD1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENTPD1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENTPD1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ENTPD1-AS1 Gene

Proteins for ENTPD1-AS1 Gene

Post-translational modifications for ENTPD1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENTPD1-AS1 Gene

Domains & Families for ENTPD1-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENTPD1-AS1 Gene

Function for ENTPD1-AS1 Gene

Phenotypes From GWAS Catalog for ENTPD1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENTPD1-AS1 Gene

Localization for ENTPD1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENTPD1-AS1 Gene

Pathways & Interactions for ENTPD1-AS1 Gene

PathCards logo

SuperPathways for ENTPD1-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENTPD1-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENTPD1-AS1 Gene

Drugs & Compounds for ENTPD1-AS1 Gene

No Compound Related Data Available

Transcripts for ENTPD1-AS1 Gene

mRNA/cDNA for ENTPD1-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for ENTPD1-AS1 Gene

No ASD Table

Relevant External Links for ENTPD1-AS1 Gene

GeneLoc Exon Structure for
ENTPD1-AS1

Expression for ENTPD1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENTPD1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ENTPD1-AS1 Gene

This gene is overexpressed in Whole Blood (x4.1).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ENTPD1-AS1

SOURCE GeneReport for Unigene cluster for ENTPD1-AS1 Gene:

Hs.538374
genes like me logo Genes that share expression patterns with ENTPD1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENTPD1-AS1 Gene

Orthologs for ENTPD1-AS1 Gene

Evolution for ENTPD1-AS1 Gene

ENSEMBL:
Gene Tree for ENTPD1-AS1 (if available)
TreeFam:
Gene Tree for ENTPD1-AS1 (if available)

No data available for Orthologs for ENTPD1-AS1 Gene

Paralogs for ENTPD1-AS1 Gene

No data available for Paralogs for ENTPD1-AS1 Gene

Variants for ENTPD1-AS1 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ENTPD1-AS1 Gene

SNP ID Clinical significance and condition Chr 10 pos Variation AA Info Type
638354 Uncertain Significance: Spastic paraplegia 64, autosomal recessive 95,845,406(-) C/A MISSENSE_VARIANT
653193 Uncertain Significance: Spastic paraplegia 64, autosomal recessive 95,866,195(-) G/A MISSENSE_VARIANT,INTRON_VARIANT
654238 Uncertain Significance: Spastic paraplegia 64, autosomal recessive 95,866,312(-) C/G MISSENSE_VARIANT,INTRON_VARIANT
703843 Benign: not provided 95,847,509(-) G/A MISSENSE_VARIANT,INTRON_VARIANT
704012 Likely Benign: not provided 95,866,188(-) C/T SYNONYMOUS_VARIANT,INTRON_VARIANT

Additional dbSNP identifiers (rs#s) for ENTPD1-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for ENTPD1-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv275e212 CNV loss 25503493
esv2665760 CNV deletion 23128226
esv2739751 CNV deletion 23290073
esv2761619 CNV loss 21179565
esv3303997 CNV mobile element insertion 20981092
esv3321957 CNV insertion 20981092
esv3359010 CNV insertion 20981092
esv3388230 CNV insertion 20981092
esv3546713 CNV deletion 23714750
esv3579077 CNV loss 25503493
esv3579080 CNV loss 25503493
esv3624287 CNV loss 21293372
esv3624289 CNV loss 21293372
esv3624291 CNV loss 21293372
nsv1052213 CNV loss 25217958
nsv1110852 OTHER inversion 24896259
nsv1119835 CNV deletion 24896259
nsv1153735 CNV deletion 26484159
nsv25405 CNV deletion 16902084
nsv477233 CNV novel sequence insertion 20440878
nsv477467 CNV novel sequence insertion 20440878
nsv507572 OTHER sequence alteration 20534489
nsv7500 CNV insertion 18451855
nsv825528 CNV loss 20364138
nsv825529 CNV loss 20364138
nsv831947 CNV gain+loss 17160897
nsv948147 CNV duplication 23825009
nsv950997 CNV duplication 24416366

Additional Variant Information for ENTPD1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ENTPD1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ENTPD1-AS1 Gene

Disorders for ENTPD1-AS1 Gene

MalaCards: The human disease database

(3) MalaCards diseases for ENTPD1-AS1 Gene - From: LncRNADisease, DISEASES, and GeneCards

Disorder Aliases PubMed IDs
astrocytoma
  • astrocytic tumor
gastric cancer
  • gastric cancer, somatic
spastic paraplegia 64, autosomal recessive
  • spg64
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for ENTPD1-AS1

genes like me logo Genes that share disorders with ENTPD1-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ENTPD1-AS1 Gene

Publications for ENTPD1-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for ENTPD1-AS1 Gene

Sources for ENTPD1-AS1 Gene