Aliases for ENSG00000287725 Gene

Aliases for ENSG00000287725 Gene

  • Novel Protein, TPCN2 - SMIM38 Readthrough 5
  • Ion_trans Domain-Containing Protein 13
  • AP003071.5 5

External Ids for ENSG00000287725 Gene

Summaries for ENSG00000287725 Gene

GeneCards Summary for ENSG00000287725 Gene

ENSG00000287725 is a Protein Coding gene. An important paralog of this gene is TPCN2.

Additional gene information for ENSG00000287725 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000287725 Gene

Genomics for ENSG00000287725 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000287725 Gene

Promoters and enhancers for ENSG00000287725 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J069071 Enhancer 0.4 dbSUPER 500.7 -1.4 -1409 0.7 ZIC2 PRDM10 GLIS1 ENSG00000287725 TPCN2 HSALNG0085295
GH11J069048 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -22.0 -22034 5.8 EP300 NRF1 POLR2G SP1 PHF8 ZIC2 POLR2A RBM34 ZBTB26 CHD1 TPCN2 HSALNG0085295 MRGPRF MRGPRF-AS1 IGHMBP2 MRPL21 MRGPRD ENSG00000287725
GH11J069072 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 +2.3 2264 4.4 FOS NCOR1 NFIC NR3C1 TAL1 STAT5A HDAC2 TCF12 GLIS1 DPF2 TPCN2 ENSG00000287725 lnc-MRGPRF-5-001 lnc-MRGPRF-5-002
GH11J069078 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.2 7186 2.6 EP300 NR3C1 CHD2 E2F6 MAX MAZ POLR2A TBP NFE2L2 ESR1 piR-54561 TPCN2 IGHMBP2 MIR3164 ENSG00000287725
GH11J069054 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 -17.1 -17104 2.9 SP1 EP300 RELA MEF2C RCOR1 TRIM22 BCL11A POLR2A TCF12 CBFB TPCN2 IGHMBP2 MRGPRF MRGPRF-AS1 MRPL21 HSALNG0085295 ENSG00000287725
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000287725 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000287725 Gene

Genomic Locations for ENSG00000287725 Gene
chr11:69,072,915-69,162,440
(GRCh38/hg38)
Size:
89,526 bases
Orientation:
Plus strand

Genomic View for ENSG00000287725 Gene

Genes around ENSG00000287725 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000287725 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000287725 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000287725 Gene

Proteins for ENSG00000287725 Gene

  • Protein details for ENSG00000287725 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1B0GVQ7-A0A1B0GVQ7_HUMAN
    Recommended name:
    Ion_trans domain-containing protein
    Protein Accession:
    A0A1B0GVQ7

    Protein attributes for ENSG00000287725 Gene

    Size:
    371 amino acids
    Molecular mass:
    42490 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000287725 Gene

Post-translational modifications for ENSG00000287725 Gene

No Post-translational modifications

Other Protein References for ENSG00000287725 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000287725 Gene

Domains & Families for ENSG00000287725 Gene

Gene Families for ENSG00000287725 Gene

Human Protein Atlas (HPA):
  • Predicted membrane proteins

Protein Domains for ENSG00000287725 Gene

genes like me logo Genes that share domains with ENSG00000287725: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000287725 Gene

Function for ENSG00000287725 Gene

Phenotypes From GWAS Catalog for ENSG00000287725 Gene

Gene Ontology (GO) - Molecular Function for ENSG00000287725 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005245 voltage-gated calcium channel activity IEA --
GO:0072345 NAADP-sensitive calcium-release channel activity IEA --
genes like me logo Genes that share ontologies with ENSG00000287725: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000287725 Gene

Localization for ENSG00000287725 Gene

Gene Ontology (GO) - Cellular Components for ENSG00000287725 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005765 lysosomal membrane IEA --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with ENSG00000287725: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for ENSG00000287725 Gene

Pathways & Interactions for ENSG00000287725 Gene

PathCards logo

SuperPathways for ENSG00000287725 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000287725 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006811 ion transport IEA --
GO:0034220 ion transmembrane transport IEA --
GO:0051209 release of sequestered calcium ion into cytosol IEA --
GO:0055085 transmembrane transport IEA --
GO:0070588 calcium ion transmembrane transport IEA --
genes like me logo Genes that share ontologies with ENSG00000287725: view

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000287725 Gene

Drugs & Compounds for ENSG00000287725 Gene

No Compound Related Data Available

Transcripts for ENSG00000287725 Gene

mRNA/cDNA for ENSG00000287725 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000287725 Gene

No ASD Table

Relevant External Links for ENSG00000287725 Gene

GeneLoc Exon Structure for
ENSG00000287725

Expression for ENSG00000287725 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000287725 Gene

Orthologs for ENSG00000287725 Gene

Evolution for ENSG00000287725 Gene

ENSEMBL:
Gene Tree for ENSG00000287725 (if available)
TreeFam:
Gene Tree for ENSG00000287725 (if available)

No data available for Orthologs for ENSG00000287725 Gene

Paralogs for ENSG00000287725 Gene

genes like me logo Genes that share paralogs with ENSG00000287725: view

Variants for ENSG00000287725 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000287725 Gene

Disorders for ENSG00000287725 Gene

No disorders were found for ENSG00000287725 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000287725 Gene

Publications for ENSG00000287725 Gene

  1. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor TD … Sakaki Y (Nature 2006) 13 54

No data available for Mastermind for ENSG00000287725 Gene

Products for ENSG00000287725 Gene

Sources for ENSG00000287725 Gene