Aliases for ENSG00000285602 Gene

Aliases for ENSG00000285602 Gene

  • Collectrin Domain-Containing Protein 13
  • Novel Protein 5
  • AC097625.2 5

External Ids for ENSG00000285602 Gene

Summaries for ENSG00000285602 Gene

GeneCards Summary for ENSG00000285602 Gene

ENSG00000285602 is a Protein Coding gene. An important paralog of this gene is CLTRN.

Additional gene information for ENSG00000285602 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000285602 Gene

Genomics for ENSG00000285602 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000285602 Gene

Promoters and enhancers for ENSG00000285602 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ015673 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -0.2 -230 3.9 FOXK2 ZBTB40 ZNF217 SIN3A NRF1 POLR2G SP1 PHF8 POLR2A ZBTB10 CLTRN CA5BP1 CA5BP1-CA5B-001 ENSG00000285602 CA5B ENSG00000200620 PIR AP1S2 PIGA ZRSR2
GH0XJ015663 Promoter/Enhancer 0.9 EPDnew Ensembl ENCODE dbSUPER 0.4 +11.0 11032 2.4 ZNF652 CLTRN CA5BP1 CA5BP1-CA5B-001 ENSG00000285602 PTMAP14
GH0XJ015687 Enhancer 0.8 Ensembl ENCODE 0.4 -11.0 -10993 2.4 CTCF RAD21 TRIM22 SMC3 FOXA2 PBX2 FOXA1 ZNF654 MEIS2 PBX3 CLTRN CA5B CA5BP1 CA5BP1-CA5B-001 ENSG00000285602
GH0XJ015680 Enhancer 0.7 ENCODE 0.4 -5.1 -5126 0.9 ATF2 GABPA ZBTB48 NR2F1 HDAC2 NR2F6 PBX3 GABPB1 KDM1A CREM PIR ENSG00000285602 CA5B CA5BP1 CA5BP1-CA5B-001
GH0XJ015596 Promoter/Enhancer 1.2 EPDnew Ensembl ENCODE 0.2 +75.9 75897 7 NCOR1 TCF7 FOXA2 CEBPB MAFF USF1 SAP130 JUN GATA3 FOXP1 ACE2 CLTRN PIR CA5BP1 CA5B GS1-594A7.3 lnc-ACE2-1 RF00017-8171 ENSG00000285602
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000285602 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000285602 Gene

Genomic Locations for ENSG00000285602 Gene
chrX:15,561,047-15,675,608
(GRCh38/hg38)
Size:
114,562 bases
Orientation:
Minus strand

Genomic View for ENSG00000285602 Gene

Genes around ENSG00000285602 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000285602 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000285602 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000285602 Gene

Proteins for ENSG00000285602 Gene

  • Protein details for ENSG00000285602 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A3B3IT09-A0A3B3IT09_HUMAN
    Recommended name:
    Collectrin domain-containing protein
    Protein Accession:
    A0A3B3IT09

    Protein attributes for ENSG00000285602 Gene

    Size:
    126 amino acids
    Molecular mass:
    14278 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000285602 Gene

Post-translational modifications for ENSG00000285602 Gene

No Post-translational modifications

Other Protein References for ENSG00000285602 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000285602 Gene

Domains & Families for ENSG00000285602 Gene

Protein Domains for ENSG00000285602 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with ENSG00000285602: view

No data available for Gene Families , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000285602 Gene

Function for ENSG00000285602 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000285602 Gene

Localization for ENSG00000285602 Gene

Gene Ontology (GO) - Cellular Components for ENSG00000285602 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with ENSG00000285602: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for ENSG00000285602 Gene

Pathways & Interactions for ENSG00000285602 Gene

PathCards logo

SuperPathways for ENSG00000285602 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000285602 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000285602 Gene

Drugs & Compounds for ENSG00000285602 Gene

No Compound Related Data Available

Transcripts for ENSG00000285602 Gene

mRNA/cDNA for ENSG00000285602 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000285602 Gene

No ASD Table

Relevant External Links for ENSG00000285602 Gene

GeneLoc Exon Structure for
ENSG00000285602

Expression for ENSG00000285602 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000285602 Gene

Orthologs for ENSG00000285602 Gene

Evolution for ENSG00000285602 Gene

ENSEMBL:
Gene Tree for ENSG00000285602 (if available)
TreeFam:
Gene Tree for ENSG00000285602 (if available)

No data available for Orthologs for ENSG00000285602 Gene

Paralogs for ENSG00000285602 Gene

Paralogs for ENSG00000285602 Gene

genes like me logo Genes that share paralogs with ENSG00000285602: view

Variants for ENSG00000285602 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000285602 Gene

Disorders for ENSG00000285602 Gene

No disorders were found for ENSG00000285602 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000285602 Gene

Publications for ENSG00000285602 Gene

  1. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross MT … Bentley DR (Nature 2005) 13 54

No data available for Mastermind for ENSG00000285602 Gene

Products for ENSG00000285602 Gene

Sources for ENSG00000285602 Gene