Aliases for ENSG00000285142 Gene

Aliases for ENSG00000285142 Gene

  • Mitochondrially Encoded Cytochrome C Oxidase I (MT-CO1) Pseudogene 5
  • AC006927.5 5

External Ids for ENSG00000285142 Gene

Summaries for ENSG00000285142 Gene

GeneCards Summary for ENSG00000285142 Gene

ENSG00000285142 is a Pseudogene.

Additional gene information for ENSG00000285142 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000285142 Gene

Genomics for ENSG00000285142 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000285142 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J007646 Enhancer 0.7 Ensembl ENCODE 600.7 +1.1 1086 1.6 CTCF PRDM1 ZNF143 TRIM22 RAD21 USF1 EBF1 ZNF654 RAD51 ENSG00000285142 DPPA3 GDF3 PEX5 piR-54715 APOBEC1 CD163
GH12J007647 Enhancer 0.3 Ensembl 600.7 -0.2 -215 0.2 PKNOX1 ENSG00000285142 DPPA3 piR-57460-108 APOBEC1 CD163
GH12J007637 Promoter/Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas 0.4 +7.4 7443 3.7 SP1 CTCF ZNF143 PKNOX1 REST RAD21 TRIM22 SCRT2 RUNX3 ZNF444 piR-31470-103 piR-33735-019 ENSG00000219410 ZNF384 SCARNA12 GDF3 LAG3 DPPA3 SLC2A14 NANOG
GH12J007642 Enhancer 0.7 ENCODE 0.7 +4.1 4086 0.2 CTCF KDM1A RCOR2 ZNF143 REST ZNF501 ZNF24 SMARCA5 HDAC2 ZNF444 piR-54715 DPPA3 ENSG00000285142 APOBEC1 CD163
GH12J007643 Enhancer 0.2 Ensembl 0.7 +3.1 3085 0.8 piR-54715 DPPA3 GDF3 CLSTN3 ENSG00000256967 RBP5 PEX5 ENSG00000285142 APOBEC1 CD163
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000285142 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000285142 Gene

Genomic Locations for ENSG00000285142 Gene
chr12:7,637,396-7,647,086
(GRCh38/hg38)
Size:
9,691 bases
Orientation:
Minus strand

Genomic View for ENSG00000285142 Gene

Genes around ENSG00000285142 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000285142 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000285142 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000285142 Gene

Proteins for ENSG00000285142 Gene

Post-translational modifications for ENSG00000285142 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000285142 Gene

Domains & Families for ENSG00000285142 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000285142 Gene

Function for ENSG00000285142 Gene

Phenotypes From GWAS Catalog for ENSG00000285142 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000285142 Gene

Localization for ENSG00000285142 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000285142 Gene

Pathways & Interactions for ENSG00000285142 Gene

PathCards logo

SuperPathways for ENSG00000285142 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000285142 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000285142 Gene

Drugs & Compounds for ENSG00000285142 Gene

No Compound Related Data Available

Transcripts for ENSG00000285142 Gene

mRNA/cDNA for ENSG00000285142 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000285142 Gene

No ASD Table

Relevant External Links for ENSG00000285142 Gene

GeneLoc Exon Structure for
ENSG00000285142

Expression for ENSG00000285142 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000285142 Gene

Orthologs for ENSG00000285142 Gene

Evolution for ENSG00000285142 Gene

ENSEMBL:
Gene Tree for ENSG00000285142 (if available)
TreeFam:
Gene Tree for ENSG00000285142 (if available)

No data available for Orthologs for ENSG00000285142 Gene

Paralogs for ENSG00000285142 Gene

No data available for Paralogs for ENSG00000285142 Gene

Variants for ENSG00000285142 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000285142 Gene

Disorders for ENSG00000285142 Gene

No disorders were found for ENSG00000285142 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000285142 Gene

Publications for ENSG00000285142 Gene

No publications were found for ENSG00000285142 Gene.

No data available for Mastermind for ENSG00000285142 Gene

Products for ENSG00000285142 Gene

Sources for ENSG00000285142 Gene