Aliases for ENSG00000285040 Gene

Subcategory (RNA class) for ENSG00000285040 Gene

lncRNA

Quality Score for this RNA gene is

12

Aliases for ENSG00000285040 Gene

  • Novel Transcript 5
  • Lnc-EMC8-13 170
  • AC092723.4 5

External Ids for ENSG00000285040 Gene

Summaries for ENSG00000285040 Gene

GeneCards Summary for ENSG00000285040 Gene

ENSG00000285040 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000285040 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000285040 Gene

Genomics for ENSG00000285040 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000285040 Gene

Promoters and enhancers for ENSG00000285040 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J085983 Promoter/Enhancer 1 FANTOM5 Ensembl ENCODE 750.6 +0.4 424 2.7 ETV6 RELA ZBED1 RUNX3 USF1 ENSG00000285040 IRF8 ENSG00000269667
GH16J085986 Promoter/Enhancer 1 Ensembl ENCODE 750.6 -1.8 -1767 1.4 RAD21 IKZF1 REST ZNF740 IKZF2 CTCF PKNOX1 MNT EED HDGF ENSG00000285040 ENSG00000285012
GH16J085988 Enhancer 1 Ensembl ENCODE 0.6 -4.8 -4765 4.1 ZNF24 SP1 CTBP1 ETV6 RELA NKRF MLLT1 POLR2A ZNF687 CREM IRF8 COX4I1 EMC8 ENSG00000285040 ENSG00000285012
GH16J085994 Promoter/Enhancer 1.4 FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.4 -10.3 -10327 2.1 ZNF24 ETV6 NKRF MLLT1 POLR2A ZNF687 PRDM1 CREM IKZF1 IKZF2 ENSG00000285012 IRF8 COX4I1 EMC8 ENSG00000285040
GH16J085982 Enhancer 0.7 FANTOM5 ENCODE 0.6 +2.9 2903 0.9 MYC MAX CEBPB POLR2A ENSG00000269667 IRF8 COX4I1 ENSG00000285040
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000285040 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000285040 Gene

Genomic Locations for ENSG00000285040 Gene
chr16:85,963,328-85,985,386
(GRCh38/hg38)
Size:
22,059 bases
Orientation:
Minus strand

Genomic View for ENSG00000285040 Gene

Genes around ENSG00000285040 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000285040 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000285040 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000285040 Gene

Proteins for ENSG00000285040 Gene

Post-translational modifications for ENSG00000285040 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000285040 Gene

Domains & Families for ENSG00000285040 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000285040 Gene

Function for ENSG00000285040 Gene

Phenotypes From GWAS Catalog for ENSG00000285040 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000285040 Gene

Localization for ENSG00000285040 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000285040 Gene

Pathways & Interactions for ENSG00000285040 Gene

PathCards logo

SuperPathways for ENSG00000285040 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000285040 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000285040 Gene

Drugs & Compounds for ENSG00000285040 Gene

No Compound Related Data Available

Transcripts for ENSG00000285040 Gene

mRNA/cDNA for ENSG00000285040 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000285040 Gene

No ASD Table

Relevant External Links for ENSG00000285040 Gene

GeneLoc Exon Structure for
ENSG00000285040

Expression for ENSG00000285040 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000285040 Gene

Orthologs for ENSG00000285040 Gene

Evolution for ENSG00000285040 Gene

ENSEMBL:
Gene Tree for ENSG00000285040 (if available)
TreeFam:
Gene Tree for ENSG00000285040 (if available)

No data available for Orthologs for ENSG00000285040 Gene

Paralogs for ENSG00000285040 Gene

No data available for Paralogs for ENSG00000285040 Gene

Variants for ENSG00000285040 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000285040 Gene

Disorders for ENSG00000285040 Gene

No disorders were found for ENSG00000285040 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000285040 Gene

Publications for ENSG00000285040 Gene

No publications were found for ENSG00000285040 Gene.

No data available for External Links for ENSG00000285040 Gene

Products for ENSG00000285040 Gene

Sources for ENSG00000285040 Gene