Aliases for ENSG00000284699 Gene

Subcategory (RNA class) for ENSG00000284699 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for ENSG00000284699 Gene

  • Novel Transcript 5
  • Lnc-CLIC4-6 165
  • AL445648.1 5

External Ids for ENSG00000284699 Gene

Summaries for ENSG00000284699 Gene

GeneCards Summary for ENSG00000284699 Gene

ENSG00000284699 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000284699 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000284699 Gene

Genomics for ENSG00000284699 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000284699 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J024704 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +0.6 601 2.4 SP1 GATAD2A PRDM10 ZNF629 ZNF512 SOX13 RCOR2 JUND FOXA1 PRDM1 ENSG00000284699 NCMAP CLIC4 piR-58297-004 SRRM1
GH01J024708 Enhancer 0.8 ENCODE dbSUPER 0.7 +4.8 4804 2 PRDM10 IKZF2 DPF2 HMBOX1 NFE2 OSR2 FOSL1 IKZF1 EBF1 ATF3 NCMAP ENSG00000284699 piR-58297-004 CLIC4 SRRM1
GH01J024707 Enhancer 0.8 ENCODE dbSUPER 0.7 +2.9 2939 0.3 JUND FOSL1 ZFHX2 ATF4 DPF2 VEZF1 ATF3 KDM1A ZEB2 FOS NCMAP ENSG00000284699 piR-58297-004 CLIC4 SRRM1
GH01J024712 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +9.4 9390 3.4 HNRNPL USF2 EGR1 CEBPB ZNF316 FOS JUND ZFHX2 FOSL2 MAFK CLIC4 RNU6-1208P SRRM1 ENSG00000284699 piR-58297-004
GH01J024709 Enhancer 0.6 dbSUPER 0.7 +3.4 3390 0.5 JUND FOSL1 ATF4 DPF2 ATF3 KDM1A ZEB2 FOS SMARCE1 ARID1B NCMAP ENSG00000284699 piR-58297-004 CLIC4 SRRM1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000284699 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000284699 Gene

Genomic Locations for ENSG00000284699 Gene
chr1:24,704,894-24,717,596
(GRCh38/hg38)
Size:
12,703 bases
Orientation:
Plus strand

Genomic View for ENSG00000284699 Gene

Genes around ENSG00000284699 on UCSC Golden Path with GeneCards custom track
ENSG00000284699 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000284699 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000284699 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000284699 Gene

Proteins for ENSG00000284699 Gene

Post-translational modifications for ENSG00000284699 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000284699 Gene

Domains & Families for ENSG00000284699 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000284699 Gene

Function for ENSG00000284699 Gene

Phenotypes From GWAS Catalog for ENSG00000284699 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000284699 Gene

Localization for ENSG00000284699 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000284699 Gene

Pathways & Interactions for ENSG00000284699 Gene

PathCards logo

SuperPathways for ENSG00000284699 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000284699 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000284699 Gene

Drugs & Compounds for ENSG00000284699 Gene

No Compound Related Data Available

Transcripts for ENSG00000284699 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000284699 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000BD7A4E_9606 lncRNA 886 2

Ensembl: ENST00000641176 (view in UCSC) ,

LNCipedia: lnc-CLIC4-6:1,

ENSG00000284699 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000284699 Gene

No ASD Table

Relevant External Links for ENSG00000284699 Gene

GeneLoc Exon Structure for
ENSG00000284699

No data available for mRNA/cDNA for ENSG00000284699 Gene

Expression for ENSG00000284699 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000284699 Gene

Orthologs for ENSG00000284699 Gene

Evolution for ENSG00000284699 Gene

ENSEMBL:
Gene Tree for ENSG00000284699 (if available)
TreeFam:
Gene Tree for ENSG00000284699 (if available)

No data available for Orthologs for ENSG00000284699 Gene

Paralogs for ENSG00000284699 Gene

No data available for Paralogs for ENSG00000284699 Gene

Variants for ENSG00000284699 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000284699 Gene

Disorders for ENSG00000284699 Gene

No disorders were found for ENSG00000284699 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000284699 Gene

Publications for ENSG00000284699 Gene

No publications were found for ENSG00000284699 Gene.

No data available for Mastermind for ENSG00000284699 Gene

Products for ENSG00000284699 Gene

Sources for ENSG00000284699 Gene