Aliases for ENSG00000284675 Gene

Subcategory (RNA class) for ENSG00000284675 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000284675 Gene

  • Novel Transcript 5
  • HSALNG0112604 164
  • Lnc-DHX38-41 165
  • AC116667.2 5

External Ids for ENSG00000284675 Gene

Summaries for ENSG00000284675 Gene

GeneCards Summary for ENSG00000284675 Gene

ENSG00000284675 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000284675 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000284675 Gene

Genomics for ENSG00000284675 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000284675 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J073124 Promoter/Enhancer 1.3 FANTOM5 Ensembl ENCODE 600.7 +1.3 1314 1.2 PRDM10 ZNF629 SP1 ZNF600 ZBTB20 ZXDB CEBPB ZSCAN5C JUN RCOR1 ENSG00000284675 RF00017-2147 LOC107984814 ZFHX3
GH16J073122 Enhancer 0.6 FANTOM5 ENCODE 600.7 -0.2 -235 1.5 PRDM10 ZBTB20 TRIM28 ENSG00000284675 ZFHX3 HCCAT5 LOC107984814
GH16J073126 Enhancer 0.7 ENCODE 0.7 +3.4 3351 0.2 CEBPG GATAD2A REST SP1 CEBPA MNT SOX13 CEBPB RFX1 FOXA2 ENSG00000284675 RF00017-2147 lnc-PMFBP1-8 LOC107984814 ZFHX3
GH16J073091 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -28.9 -28914 4.8 CREB1 GATAD2A ZNF629 PRDM10 TFE3 ZNF692 RCOR2 ZNF7 PRDM1 ZIC2 ZFHX3 HCCAT5 ENSG00000284675 LOC107984814
GH16J073120 Enhancer 0.5 Ensembl 0.7 -3.1 -3095 0.4 GATAD2A RXRB FOXA2 RARA NFIA HMG20A ZFHX3 ENSG00000284675 HCCAT5 LOC107984814
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000284675 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000284675 Gene

Genomic Locations for ENSG00000284675 Gene
chr16:73,123,296-73,137,580
(GRCh38/hg38)
Size:
14,285 bases
Orientation:
Plus strand

Genomic View for ENSG00000284675 Gene

Genes around ENSG00000284675 on UCSC Golden Path with GeneCards custom track
ENSG00000284675 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000284675 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000284675 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000284675 Gene

Proteins for ENSG00000284675 Gene

Post-translational modifications for ENSG00000284675 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000284675 Gene

Domains & Families for ENSG00000284675 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000284675 Gene

Function for ENSG00000284675 Gene

Phenotypes From GWAS Catalog for ENSG00000284675 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000284675 Gene

Localization for ENSG00000284675 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000284675 Gene

Pathways & Interactions for ENSG00000284675 Gene

PathCards logo

SuperPathways for ENSG00000284675 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000284675 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000284675 Gene

Drugs & Compounds for ENSG00000284675 Gene

No Compound Related Data Available

Transcripts for ENSG00000284675 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000284675 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000BCC795_9606 lncRNA 823 3

Ensembl: ENST00000641075 (view in UCSC) ,

LncBook: HSALNT0233374,

LNCipedia: lnc-DHX38-41:1,

URS00019BA7A5_9606 lncRNA 544 1

ENA: MN297390.1:1..544:ncRNA,

ENSG00000284675 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000284675 Gene

No ASD Table

Relevant External Links for ENSG00000284675 Gene

GeneLoc Exon Structure for
ENSG00000284675

No data available for mRNA/cDNA for ENSG00000284675 Gene

Expression for ENSG00000284675 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000284675 Gene

Orthologs for ENSG00000284675 Gene

Evolution for ENSG00000284675 Gene

ENSEMBL:
Gene Tree for ENSG00000284675 (if available)
TreeFam:
Gene Tree for ENSG00000284675 (if available)

No data available for Orthologs for ENSG00000284675 Gene

Paralogs for ENSG00000284675 Gene

No data available for Paralogs for ENSG00000284675 Gene

Variants for ENSG00000284675 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000284675 Gene

Disorders for ENSG00000284675 Gene

No disorders were found for ENSG00000284675 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000284675 Gene

Publications for ENSG00000284675 Gene

No publications were found for ENSG00000284675 Gene.

No data available for Mastermind for ENSG00000284675 Gene

Products for ENSG00000284675 Gene

Sources for ENSG00000284675 Gene