Aliases for ENSG00000284641 Gene

Subcategory (RNA class) for ENSG00000284641 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000284641 Gene

  • Novel Transcript 5
  • NONHSAG000575.2 91
  • Lnc-FAM43B-20 165
  • HSALNG0001441 164
  • AL139254.2 5

External Ids for ENSG00000284641 Gene

Summaries for ENSG00000284641 Gene

GeneCards Summary for ENSG00000284641 Gene

ENSG00000284641 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000284641 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000284641 Gene

Genomics for ENSG00000284641 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000284641 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J020474 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 +4.9 4859 13.8 ZNF221 ARHGAP35 CEBPG HNRNPL GATAD2A PRDM10 ZNF629 REST TFE3 ZNF512 CAMK2N1 ENSG00000284743 HP1BP3 DDOST NBPF2P OTUD3 MUL1 FAM43B NBPF3 ENSG00000226396
GH01J020472 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -2.8 -2847 1.3 KDM1A HDAC1 NRF1 ZBTB2 HDAC2 USF1 MNT MYC BCOR SAP130 MUL1 ENSG00000226664 FAM43B ENSG00000284641 CAMK2N1 piR-43105-021 VWA5B1
GH01J020469 Enhancer 0.7 Ensembl dbSUPER 0.4 -5.7 -5722 0.6 ZNF692 ZBTB17 PKNOX1 NFIC NFIB HIC1 TFAP4 ZKSCAN1 CHD2 LCORL MUL1 ENSG00000284641 CAMK2N1 piR-43105-021 VWA5B1
GH01J020461 Enhancer 0.5 dbSUPER 0.4 -13.8 -13752 2.7 CREB1 ZNF10 ZNF513 ZNF521 ZNF143 KLF1 EGR2 MUL1 CAMK2N1 VWA5B1 ENSG00000284641 piR-43105-021
GH01J020454 Enhancer 0.5 FANTOM5 0.4 -21.8 -21816 0.1 ZSCAN4 ZNF248 TSC22D4 PLRG1 ZNF785 HP1BP3 OTUD3 PLA2G2A piR-43105-021 ENSG00000284641 CAMK2N1 VWA5B1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000284641 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000284641 Gene

Genomic Locations for ENSG00000284641 Gene
chr1:20,476,222-20,478,937
(GRCh38/hg38)
Size:
2,716 bases
Orientation:
Plus strand

Genomic View for ENSG00000284641 Gene

Genes around ENSG00000284641 on UCSC Golden Path with GeneCards custom track
ENSG00000284641 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000284641 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000284641 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000284641 Gene

Proteins for ENSG00000284641 Gene

Post-translational modifications for ENSG00000284641 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000284641 Gene

Domains & Families for ENSG00000284641 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000284641 Gene

Function for ENSG00000284641 Gene

Phenotypes From GWAS Catalog for ENSG00000284641 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000284641 Gene

Localization for ENSG00000284641 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000284641 Gene

Pathways & Interactions for ENSG00000284641 Gene

PathCards logo

SuperPathways for ENSG00000284641 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000284641 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000284641 Gene

Drugs & Compounds for ENSG00000284641 Gene

No Compound Related Data Available

Transcripts for ENSG00000284641 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000284641 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000BD87D6_9606 lncRNA 1156 3

Ensembl: ENST00000641937 (view in UCSC) ,

LncBook: HSALNT0002733,

LNCipedia: lnc-FAM43B-20:3,

URS0000BC4EF8_9606 lncRNA 986 3

Ensembl: ENST00000641552 (view in UCSC) ,

LncBook: HSALNT0002731,

LNCipedia: lnc-FAM43B-20:1,

URS00008B9B3F_9606 lncRNA 772 2

LNCipedia: lnc-FAM43B-20:2,

NONCODE: NONHSAT001371.2,

ENSG00000284641 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000284641 Gene

No ASD Table

Relevant External Links for ENSG00000284641 Gene

GeneLoc Exon Structure for
ENSG00000284641

No data available for mRNA/cDNA for ENSG00000284641 Gene

Expression for ENSG00000284641 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000284641 Gene

Orthologs for ENSG00000284641 Gene

Evolution for ENSG00000284641 Gene

ENSEMBL:
Gene Tree for ENSG00000284641 (if available)
TreeFam:
Gene Tree for ENSG00000284641 (if available)

No data available for Orthologs for ENSG00000284641 Gene

Paralogs for ENSG00000284641 Gene

No data available for Paralogs for ENSG00000284641 Gene

Variants for ENSG00000284641 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000284641 Gene

Disorders for ENSG00000284641 Gene

No disorders were found for ENSG00000284641 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000284641 Gene

Publications for ENSG00000284641 Gene

No publications were found for ENSG00000284641 Gene.

No data available for Mastermind for ENSG00000284641 Gene

Products for ENSG00000284641 Gene

Sources for ENSG00000284641 Gene