Aliases for ENSG00000283538 Gene

Data sources for ENSG00000283538 Gene:

RNA type for ENSG00000283538 Gene

lncRNA

Aliases for ENSG00000283538 Gene

External Ids for ENSG00000283538 Gene

Summaries for ENSG00000283538 Gene

GeneCards Summary for ENSG00000283538 Gene

ENSG00000283538 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000283538 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000283538 Gene

Genomics for ENSG00000283538 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000283538 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J062970 Enhancer 0.3 Ensembl 250.7 -1.6 -1605 0.2 CEBPB CEBPG ENSG00000283538 TANC2 ENSG00000270324 lnc-MARCH10-7 CYB561
GH17J062964 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.7 +3.3 3271 4.4 MYC ZNF654 ZNF600 JUND ZNF580 ATF2 CEBPA POLR2A ZIC2 ZBTB10 TANC2 CYB561 TLK2 DDX42 ENSG00000265971 ENSG00000283538
GH17J062962 Enhancer 0.8 Ensembl ENCODE 0.4 +6.7 6716 1.3 IKZF1 JUND MAX EP300 STAT3 SMARCA4 GATA2 DPF2 ARID1B JUNB CYB561 ENSG00000265971 TANC2 ENSG00000283538 lnc-MARCH10-6 TRMT112P3 MARCHF10
GH17J062949 Enhancer 0.9 Ensembl ENCODE 0.4 +20.2 20191 1 IKZF1 ZIC2 DEK KLF7 ZNF217 MBD2 CTBP1 ZNF610 CUX1 ZNF146 TRMT112P3 lnc-MARCH10-6 MIR633 TANC2 ENSG00000283538 MARCHF10
GH17J062919 Enhancer 0.9 Ensembl ENCODE 0.2 +50.8 50840 0.8 NCOR1 IKZF1 NFIC TAF9B TAL1 ZNF316 NFE2 ATF1 STAT5A ZNF318 MIR633 HSALNG0117983-002 TANC2 ENSG00000283538 MARCHF10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000283538 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000283538 Gene

Latest Assembly
chr17:62,909,812-62,970,296
(GRCh38/hg38)
Size:
60,485 bases
Orientation:
Minus strand

Genomic View for ENSG00000283538 Gene

Genes around ENSG00000283538 on UCSC Golden Path with GeneCards custom track
ENSG00000283538 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000283538 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000283538 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000283538 Gene

Proteins for ENSG00000283538 Gene

Post-translational modifications for ENSG00000283538 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000283538 Gene

Domains & Families for ENSG00000283538 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000283538 Gene

Function for ENSG00000283538 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000283538 Gene

Localization for ENSG00000283538 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000283538 Gene

Pathways & Interactions for ENSG00000283538 Gene

PathCards logo

SuperPathways for ENSG00000283538 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000283538 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000283538 Gene

Drugs & Compounds for ENSG00000283538 Gene

No Compound Related Data Available

Transcripts for ENSG00000283538 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000283538 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000019936F_9606 lncRNA 912 3

Ensembl: ENST00000581596 (view in UCSC) ,

LNCipedia: lnc-MARCH10-1:4, lnc-MARCH10-1:6,

NONCODE: NONHSAT055187.2,

URS0000DBAF95_9606 lncRNA 2080 1

Ensembl: ENST00000650312 (view in UCSC) ,

URS0000EF4DA6_9606 lncRNA 1138 1

Ensembl: ENST00000636248 (view in UCSC) ,

URS00008B9FE6_9606 lncRNA 289 3

LncBook: HSALNT0243645,

LNCipedia: lnc-MARCH10-1:2,

NONCODE: NONHSAT055182.2,

URS00003986BA_9606 lncRNA 498 2

LNCipedia: lnc-MARCH10-1:1,

NONCODE: NONHSAT055183.2,

ENSG00000283538 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000283538 Gene

No ASD Table

Relevant External Links for ENSG00000283538 Gene

GeneLoc Exon Structure for
ENSG00000283538

No data available for mRNA/cDNA for ENSG00000283538 Gene

Expression for ENSG00000283538 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000283538 Gene

Orthologs for ENSG00000283538 Gene

Evolution for ENSG00000283538 Gene

ENSEMBL:
Gene Tree for ENSG00000283538 (if available)
TreeFam:
Gene Tree for ENSG00000283538 (if available)

No data available for Orthologs for ENSG00000283538 Gene

Paralogs for ENSG00000283538 Gene

No data available for Paralogs for ENSG00000283538 Gene

Variants for ENSG00000283538 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000283538 Gene

Disorders for ENSG00000283538 Gene

No disorders were found for ENSG00000283538 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000283538 Gene

Publications for ENSG00000283538 Gene

No publications were found for ENSG00000283538 Gene.

No data available for Mastermind for ENSG00000283538 Gene

Products for ENSG00000283538 Gene

Sources for ENSG00000283538 Gene