Aliases for ENSG00000283400 Gene

Subcategory (RNA class) for ENSG00000283400 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000283400 Gene

  • Novel Transcript 5
  • NONHSAG054133.2 91
  • HSALNG0136932 164
  • Lnc-CNKSR2-2 165
  • AL807740.1 5

External Ids for ENSG00000283400 Gene

Summaries for ENSG00000283400 Gene

GeneCards Summary for ENSG00000283400 Gene

ENSG00000283400 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000283400 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000283400 Gene

Genomics for ENSG00000283400 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000283400 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ020442 Enhancer 0.8 ENCODE 600.7 -0.5 -463 0.8 GATAD2A CTCF RCOR2 ZNF143 ZNF24 RXRB REST RAD21 TRIM22 GABPA ENSG00000283400 RPS6KA3 piR-39858-671 CNKSR2
GH0XJ020443 Enhancer 0.2 Ensembl 600.7 +0.4 375 0.2 ENSG00000283400 RPS6KA3 RF00100-159 RN7SKP183 lnc-CNKSR2-3 CNKSR2
GH0XJ020434 Enhancer 0.8 Ensembl ENCODE 0.4 -9.3 -9316 5.2 GATAD2A REST RBFOX2 SP1 CEBPA RUNX3 ZNF316 MAFF MAFK MAFG RPS6KA3 ENSG00000283400 piR-39858-671 CNKSR2
GH0XJ020471 Enhancer 0.9 ENCODE dbSUPER 0.3 +28.4 28352 0.2 GATAD2A TFE3 SOX13 RCOR2 RXRB CEBPA TCF7 FOXA2 EP300 TEAD1 RF00100-159 RN7SKP183 lnc-CNKSR2-3 ENSG00000283400 piR-31534-711 RPS6KA3 CNKSR2
GH0XJ020476 Enhancer 1 ENCODE dbSUPER 0.3 +35.4 35447 5.5 GATAD2A TFE3 SOX13 NFKBIZ RCOR2 RBFOX2 RXRB GABPA CEBPA TCF7 RPS6KA3 RF00100-159 RN7SKP183 lnc-CNKSR2-3 ENSG00000283400 piR-31534-711 CNKSR2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000283400 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000283400 Gene

Genomic Locations for ENSG00000283400 Gene
chrX:20,443,326-20,492,349
(GRCh38/hg38)
Size:
49,024 bases
Orientation:
Plus strand

Genomic View for ENSG00000283400 Gene

Genes around ENSG00000283400 on UCSC Golden Path with GeneCards custom track
ENSG00000283400 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000283400 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000283400 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000283400 Gene

Proteins for ENSG00000283400 Gene

Post-translational modifications for ENSG00000283400 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000283400 Gene

Domains & Families for ENSG00000283400 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000283400 Gene

Function for ENSG00000283400 Gene

Phenotypes From GWAS Catalog for ENSG00000283400 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000283400 Gene

Localization for ENSG00000283400 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000283400 Gene

Pathways & Interactions for ENSG00000283400 Gene

PathCards logo

SuperPathways for ENSG00000283400 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000283400 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000283400 Gene

Drugs & Compounds for ENSG00000283400 Gene

No Compound Related Data Available

Transcripts for ENSG00000283400 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000283400 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000A7A1A4_9606 lncRNA 567 3

Ensembl: ENST00000636971 (view in UCSC) ,

LncBook: HSALNT0280751,

LNCipedia: lnc-CNKSR2-2:2,

URS00008BB33F_9606 lncRNA 3363 3

LncBook: HSALNT0280764,

LNCipedia: lnc-CNKSR2-2:1,

NONCODE: NONHSAT136455.2,

URS00009AE842_9606 lncRNA 5093 1

NONCODE: NONHSAT222549.1,

URS00009B93BB_9606 lncRNA 4998 1

NONCODE: NONHSAT222548.1,

URS00009BB672_9606 lncRNA 4957 1

NONCODE: NONHSAT222547.1,

ENSG00000283400 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000283400 Gene

No ASD Table

Relevant External Links for ENSG00000283400 Gene

GeneLoc Exon Structure for
ENSG00000283400

No data available for mRNA/cDNA for ENSG00000283400 Gene

Expression for ENSG00000283400 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000283400 Gene

Orthologs for ENSG00000283400 Gene

Evolution for ENSG00000283400 Gene

ENSEMBL:
Gene Tree for ENSG00000283400 (if available)
TreeFam:
Gene Tree for ENSG00000283400 (if available)

No data available for Orthologs for ENSG00000283400 Gene

Paralogs for ENSG00000283400 Gene

No data available for Paralogs for ENSG00000283400 Gene

Variants for ENSG00000283400 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000283400 Gene

Disorders for ENSG00000283400 Gene

No disorders were found for ENSG00000283400 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000283400 Gene

Publications for ENSG00000283400 Gene

No publications were found for ENSG00000283400 Gene.

No data available for Mastermind for ENSG00000283400 Gene

Products for ENSG00000283400 Gene

Sources for ENSG00000283400 Gene