Aliases for ENSG00000283300 Gene

Subcategory (RNA class) for ENSG00000283300 Gene

snRNA

Number of RNA Genes sources:

1 / 14

Aliases for ENSG00000283300 Gene

  • U6 Spliceosomal RNA 5
  • RF00026 172
  • U6 5

External Ids for ENSG00000283300 Gene

Summaries for ENSG00000283300 Gene

GeneCards Summary for ENSG00000283300 Gene

ENSG00000283300 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for ENSG00000283300 Gene

Additional gene information for ENSG00000283300 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000283300 Gene

Genomics for ENSG00000283300 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000283300 Gene

Promoters and enhancers for ENSG00000283300 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J028742 Enhancer 0.4 ENCODE 500.7 -0.5 -474 0.2 CTCF RAD21 RFX5 NFE2L2 SMC3 ENSG00000283300 N6AMT1 piR-40110-437
GH21J028744 Promoter/Enhancer 1.1 ENCODE CraniofacialAtlas 0.7 +2.1 2056 1.4 CTCF USF1 TEAD4 ZBTB10 REST MYC RAD21 TRIM22 TEAD1 SMC3 USP16 N6AMT1 LTN1 ENSG00000283300 piR-31470-308
GH21J028737 Enhancer 0.6 Ensembl ENCODE 0.7 -4.8 -4808 2.8 NR2F2 NFIC NFIB NFIA N6AMT1 CCT8 LTN1 RWDD2B ENSG00000283300 piR-40110-437
GH21J028752 Enhancer 0.7 Ensembl ENCODE 0.4 +12.0 12039 5.5 JUND NR2F2 MAX BHLHE40 GATA3 NFE2L2 POLR2A SP1 CEBPB SCRT2 CCT8 USP16 N6AMT1 RWDD2B ENSG00000283300 piR-31470-308
GH21J028770 Enhancer 0.7 Ensembl ENCODE 0.3 +28.6 28613 2.8 JUND FOXA2 CTCF RXRA HNF4A ZNF350 FOXA1 NFE2L2 PRDM10 EBF1 CCT8 N6AMT1 LTN1 piR-31470-308 ENSG00000283300
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000283300 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000283300 Gene

Genomic Locations for ENSG00000283300 Gene
chr21:28,743,208-28,743,291
(GRCh38/hg38)
Size:
84 bases
Orientation:
Plus strand

Genomic View for ENSG00000283300 Gene

Genes around ENSG00000283300 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000283300 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000283300 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000283300 Gene

Proteins for ENSG00000283300 Gene

Post-translational modifications for ENSG00000283300 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000283300 Gene

Domains & Families for ENSG00000283300 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000283300 Gene

Function for ENSG00000283300 Gene

Phenotypes From GWAS Catalog for ENSG00000283300 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000283300 Gene

Localization for ENSG00000283300 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000283300 Gene

Pathways & Interactions for ENSG00000283300 Gene

PathCards logo

SuperPathways for ENSG00000283300 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000283300 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000283300 Gene

Drugs & Compounds for ENSG00000283300 Gene

No Compound Related Data Available

Transcripts for ENSG00000283300 Gene

mRNA/cDNA for ENSG00000283300 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000283300 Gene

No ASD Table

Relevant External Links for ENSG00000283300 Gene

GeneLoc Exon Structure for
ENSG00000283300

Expression for ENSG00000283300 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000283300 Gene

Orthologs for ENSG00000283300 Gene

Evolution for ENSG00000283300 Gene

ENSEMBL:
Gene Tree for ENSG00000283300 (if available)
TreeFam:
Gene Tree for ENSG00000283300 (if available)

No data available for Orthologs for ENSG00000283300 Gene

Paralogs for ENSG00000283300 Gene

No data available for Paralogs for ENSG00000283300 Gene

Variants for ENSG00000283300 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000283300 Gene

Disorders for ENSG00000283300 Gene

No disorders were found for ENSG00000283300 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000283300 Gene

Publications for ENSG00000283300 Gene

No publications were found for ENSG00000283300 Gene.

No data available for Mastermind for ENSG00000283300 Gene

Products for ENSG00000283300 Gene

Sources for ENSG00000283300 Gene