Aliases for ENSG00000283255 Gene

Subcategory (RNA class) for ENSG00000283255 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000283255 Gene

  • Novel Transcript 5
  • NONHSAG003397.2 91
  • HSALNG0008288 164
  • AL022100.2 5
  • Lnc-XCL2-2 165

External Ids for ENSG00000283255 Gene

Summaries for ENSG00000283255 Gene

GeneCards Summary for ENSG00000283255 Gene

ENSG00000283255 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000283255 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000283255 Gene

Genomics for ENSG00000283255 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000283255 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J168421 Enhancer 0.8 Ensembl ENCODE 600.7 +1.2 1156 3.4 RFX1 PKNOX1 POLR2A REST IKZF2 DPF2 JUND NFE2 ZNF316 MAFG ENSG00000283255 LOC100505918 MIR557 ENSG00000228697 XCL2 TBX19
GH01J168443 Enhancer 1 Ensembl ENCODE 0.4 -22.4 -22444 4.2 ZNF512 IKZF1 JUND MTA2 PKNOX1 MTA1 ZNF24 DPF2 HDAC1 SOX6 ATP1B1 MIR557 LOC101928596 TBX19 QRSL1P1 ENSG00000283255 ENSG00000228697 XCL2
GH01J168407 Enhancer 0.8 ENCODE 0.4 +13.6 13619 3 CREB1 PRDM10 ZNF629 IKZF1 JUND IKZF2 TRIM22 ZNF341 ARID3A ZNF639 MIR557 NME7 TBX19 ATP1B1 LOC101928596 RCSD1 GPR161 LOC100505918 ENSG00000283255 ENSG00000228697
GH01J168439 Enhancer 0.8 ENCODE 0.4 -17.4 -17371 0.9 CTCF ZNF629 ZNF692 JUND LARP7 ZNF143 ZSCAN4 REST RAD21 IRF2 ATP1B1 LOC101928596 QRSL1P1 ENSG00000283255 ENSG00000228697 XCL2 TBX19
GH01J168429 Enhancer 0.6 Ensembl ENCODE 0.4 -5.7 -5744 1.6 JUND NR2F2 POU5F1 POLR2A MIR557 ENSG00000283255 QRSL1P1 ENSG00000228697 XCL2 TBX19
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000283255 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000283255 Gene

Genomic Locations for ENSG00000283255 Gene
chr1:168,400,830-168,422,657
(GRCh38/hg38)
Size:
21,828 bases
Orientation:
Minus strand

Genomic View for ENSG00000283255 Gene

Genes around ENSG00000283255 on UCSC Golden Path with GeneCards custom track
ENSG00000283255 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000283255 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000283255 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000283255 Gene

Proteins for ENSG00000283255 Gene

Post-translational modifications for ENSG00000283255 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000283255 Gene

Domains & Families for ENSG00000283255 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000283255 Gene

Function for ENSG00000283255 Gene

Phenotypes From GWAS Catalog for ENSG00000283255 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000283255 Gene

Localization for ENSG00000283255 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000283255 Gene

Pathways & Interactions for ENSG00000283255 Gene

PathCards logo

SuperPathways for ENSG00000283255 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000283255 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000283255 Gene

Drugs & Compounds for ENSG00000283255 Gene

No Compound Related Data Available

Transcripts for ENSG00000283255 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000283255 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000019EED6_9606 lncRNA 389 4

Ensembl: ENST00000422548 (view in UCSC) ,

LncBook: HSALNT0017136,

LNCipedia: lnc-XCL2-2:2,

NONCODE: NONHSAT007438.2,

URS00008BBCD4_9606 lncRNA 2441 3

LncBook: HSALNT0017134,

LNCipedia: lnc-XCL2-2:3,

NONCODE: NONHSAT007437.2,

URS00009B9F99_9606 lncRNA 1837 2

LncBook: HSALNT0017135,

NONCODE: NONHSAT152507.1,

ENSG00000283255 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000283255 Gene

No ASD Table

Relevant External Links for ENSG00000283255 Gene

GeneLoc Exon Structure for
ENSG00000283255

No data available for mRNA/cDNA for ENSG00000283255 Gene

Expression for ENSG00000283255 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000283255 Gene

Orthologs for ENSG00000283255 Gene

Evolution for ENSG00000283255 Gene

ENSEMBL:
Gene Tree for ENSG00000283255 (if available)
TreeFam:
Gene Tree for ENSG00000283255 (if available)

No data available for Orthologs for ENSG00000283255 Gene

Paralogs for ENSG00000283255 Gene

No data available for Paralogs for ENSG00000283255 Gene

Variants for ENSG00000283255 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000283255 Gene

Disorders for ENSG00000283255 Gene

No disorders were found for ENSG00000283255 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000283255 Gene

Publications for ENSG00000283255 Gene

No publications were found for ENSG00000283255 Gene.

No data available for Mastermind for ENSG00000283255 Gene

Products for ENSG00000283255 Gene

Sources for ENSG00000283255 Gene