Aliases for ENSG00000282246 Gene

Aliases for ENSG00000282246 Gene

  • Pre-MRNA-Splicing Factor 18 13
  • Uncharacterized Protein 13
  • Novel Protein 5
  • AL157392.5 5

External Ids for ENSG00000282246 Gene

Previous GeneCards Identifiers for ENSG00000282246 Gene

  • GC10P013612

Summaries for ENSG00000282246 Gene

GeneCards Summary for ENSG00000282246 Gene

ENSG00000282246 is a Protein Coding gene. An important paralog of this gene is PRPF18.

Additional gene information for ENSG00000282246 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000282246 Gene

Genomics for ENSG00000282246 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000282246 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J013607 Enhancer 0.3 Ensembl ENCODE 250.7 -1.3 -1259 2 ENSG00000282246 ENSG00000239665 PRPF18 ENSG00000234091 RNA5SP301 ENSG00000225112 RPL6P24
GH10J013610 Promoter 0.3 EPDnew 250.7 +0.0 22 0.1 ENSG00000282246 PRPF18 ENSG00000239665 piR-49657 FRMD4A
GH10J013586 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.3 -22.6 -22586 2.3 TBP SP1 MXD4 SIX5 NR2C1 MNT SMAD5 ETS1 ZNF217 POLR2A PRPF18 ENSG00000239665 piR-38580-029 BTBD7P1 lnc-FRMD4A-2 ENSG00000282246
GH10J013614 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 0.4 +5.6 5554 2.8 ZNF217 ZIC2 CEBPB EP300 CTBP1 SIN3A PRDM6 CTCF SMARCE1 ZFP37 ENSG00000239665 ENSG00000282246 piR-49657 PRPF18 FRMD4A
GH10J013613 Enhancer 0.5 ENCODE 0.7 +3.7 3679 0.1 CTCF RAD21 PRDM6 ZNF660 ZNF680 SMC3 ZNF654 ENSG00000282246 piR-49657 ENSG00000239665 PRPF18 FRMD4A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000282246 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000282246 Gene

Latest Assembly
chr10:13,610,047-13,655,929
(GRCh38/hg38)
Size:
45,883 bases
Orientation:
Plus strand

Genomic View for ENSG00000282246 Gene

Genes around ENSG00000282246 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000282246 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000282246 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000282246 Gene

Proteins for ENSG00000282246 Gene

  • Protein details for ENSG00000282246 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    M0QXG2-M0QXG2_HUMAN
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    M0QXG2

    Protein attributes for ENSG00000282246 Gene

    Size:
    34 amino acids
    Molecular mass:
    4023 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000282246 Gene

Post-translational modifications for ENSG00000282246 Gene

No Post-translational modifications

Other Protein References for ENSG00000282246 Gene

No data available for DME Specific Peptides for ENSG00000282246 Gene

Domains & Families for ENSG00000282246 Gene

Gene Families for ENSG00000282246 Gene

Unknown:
  • Belongs to the PRP18 family.
Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for ENSG00000282246 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with ENSG00000282246: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000282246 Gene

Function for ENSG00000282246 Gene

Phenotypes From GWAS Catalog for ENSG00000282246 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000282246 Gene

Localization for ENSG00000282246 Gene

Gene Ontology (GO) - Cellular Components for ENSG00000282246 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
GO:0005681 spliceosomal complex IEA --
GO:0005682 U5 snRNP IBA --
GO:0046540 U4/U6 x U5 tri-snRNP complex IBA --
GO:0071021 U2-type post-spliceosomal complex IBA --
genes like me logo Genes that share ontologies with ENSG00000282246: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for ENSG00000282246 Gene

Pathways & Interactions for ENSG00000282246 Gene

PathCards logo

SuperPathways for ENSG00000282246 Gene

No Data Available

Interacting Proteins for ENSG00000282246 Gene

STRING Interaction Network Preview (showing top 5 STRING interactants - click image to see top 25)
STRING Interaction Network
Selected Interacting proteins: ENSP00000473200 for ENSG00000282246 Gene via STRING

Gene Ontology (GO) - Biological Process for ENSG00000282246 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000350 generation of catalytic spliceosome for second transesterification step IBA --
GO:0006397 mRNA processing IEA --
GO:0008380 RNA splicing IEA --
GO:0071048 nuclear retention of unspliced pre-mRNA at the site of transcription IBA --
genes like me logo Genes that share ontologies with ENSG00000282246: view

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000282246 Gene

Drugs & Compounds for ENSG00000282246 Gene

No Compound Related Data Available

Transcripts for ENSG00000282246 Gene

mRNA/cDNA for ENSG00000282246 Gene

3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000282246 Gene

No ASD Table

Relevant External Links for ENSG00000282246 Gene

GeneLoc Exon Structure for
ENSG00000282246

Expression for ENSG00000282246 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000282246 Gene

Orthologs for ENSG00000282246 Gene

Evolution for ENSG00000282246 Gene

ENSEMBL:
Gene Tree for ENSG00000282246 (if available)
TreeFam:
Gene Tree for ENSG00000282246 (if available)

No data available for Orthologs for ENSG00000282246 Gene

Paralogs for ENSG00000282246 Gene

Paralogs for ENSG00000282246 Gene

genes like me logo Genes that share paralogs with ENSG00000282246: view

Variants for ENSG00000282246 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000282246 Gene

Disorders for ENSG00000282246 Gene

Additional Disease Information for ENSG00000282246

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000282246 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000282246 Gene

Publications for ENSG00000282246 Gene

  1. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P … Rogers J (Nature 2004) 13

No data available for Mastermind for ENSG00000282246 Gene

Products for ENSG00000282246 Gene

Sources for ENSG00000282246 Gene