Aliases for ENSG00000281920 Gene

Subcategory (RNA class) for ENSG00000281920 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000281920 Gene

  • Novel Transcript 5
  • NONHSAG027998.2 91
  • HSALNG0015543 164
  • Lnc-ACTR2-3 165
  • AC007389.5 5

External Ids for ENSG00000281920 Gene

Summaries for ENSG00000281920 Gene

GeneCards Summary for ENSG00000281920 Gene

ENSG00000281920 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000281920 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000281920 Gene

Genomics for ENSG00000281920 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000281920 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J065622 Enhancer 0.3 FANTOM5 600.7 -0.6 -561 0.2 CBFA2T3 ENSG00000281920 lnc-SPRED2-13 ENSG00000235725 ENSG00000204929 SPRED2 MEIS1
GH02J065630 Enhancer 0.8 Ensembl ENCODE 0.4 +7.5 7497 1.2 JUND CEBPB CTBP1 NFE2 NR3C1 JUN FOSL1 FOSL2 CEBPG CREM ENSG00000235725 ENSG00000281920 ENSG00000204929 SPRED2 MEIS1
GH02J065612 Enhancer 0.7 Ensembl ENCODE 0.4 -10.5 -10537 1.9 RFX1 BMI1 ESR1 GATAD2B FOXA1 FOS SP1 ENSG00000235725 lnc-SPRED2-13 ENSG00000281920 ENSG00000204929 SPRED2 MEIS1
GH02J065639 Enhancer 0.6 ENCODE 0.4 +16.4 16380 0 ZIC2 ZNF341 ESR1 POLR2A WT1 ZFHX2 NFIB GLIS1 TCF7L2 ZNF217 ENSG00000235725 ENSG00000281920 SPRED2 ENSG00000204929 MEIS1
GH02J065614 Enhancer 0.4 Ensembl 0.4 -9.0 -8971 0.6 ZNF23 ZBTB17 SPI1 MLLT1 ENSG00000235725 ENSG00000281920 lnc-SPRED2-13 ENSG00000204929 SPRED2 MEIS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000281920 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000281920 Gene

Genomic Locations for ENSG00000281920 Gene
chr2:65,623,272-65,628,424
(GRCh38/hg38)
Size:
5,153 bases
Orientation:
Plus strand

Genomic View for ENSG00000281920 Gene

Genes around ENSG00000281920 on UCSC Golden Path with GeneCards custom track
ENSG00000281920 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000281920 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000281920 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000281920 Gene

Proteins for ENSG00000281920 Gene

Post-translational modifications for ENSG00000281920 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000281920 Gene

Domains & Families for ENSG00000281920 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000281920 Gene

Function for ENSG00000281920 Gene

Phenotypes From GWAS Catalog for ENSG00000281920 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000281920 Gene

Localization for ENSG00000281920 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000281920 Gene

Pathways & Interactions for ENSG00000281920 Gene

PathCards logo

SuperPathways for ENSG00000281920 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000281920 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000281920 Gene

Drugs & Compounds for ENSG00000281920 Gene

No Compound Related Data Available

Transcripts for ENSG00000281920 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000281920 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000811B3A_9606 lncRNA 744 3

Ensembl: ENST00000629214 (view in UCSC) ,

LncBook: HSALNT0032917,

LNCipedia: lnc-ACTR2-3:36,

URS0000D5A98F_9606 lncRNA 1143 2

LncBook: HSALNT0032876,

LNCipedia: lnc-ACTR2-3:26,

URS00008BAD46_9606 lncRNA 1113 2

LNCipedia: lnc-ACTR2-3:11,

NONCODE: NONHSAT071173.2,

URS0000D58BCE_9606 lncRNA 483 2

LncBook: HSALNT0032902,

LNCipedia: lnc-ACTR2-3:35,

URS0000D5C60E_9606 lncRNA 2366 1

LNCipedia: lnc-ACTR2-3:24,

ENSG00000281920 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000281920 Gene

No ASD Table

Relevant External Links for ENSG00000281920 Gene

GeneLoc Exon Structure for
ENSG00000281920

No data available for mRNA/cDNA for ENSG00000281920 Gene

Expression for ENSG00000281920 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000281920 Gene

Orthologs for ENSG00000281920 Gene

Evolution for ENSG00000281920 Gene

ENSEMBL:
Gene Tree for ENSG00000281920 (if available)
TreeFam:
Gene Tree for ENSG00000281920 (if available)

No data available for Orthologs for ENSG00000281920 Gene

Paralogs for ENSG00000281920 Gene

No data available for Paralogs for ENSG00000281920 Gene

Variants for ENSG00000281920 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000281920 Gene

Disorders for ENSG00000281920 Gene

No disorders were found for ENSG00000281920 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000281920 Gene

Publications for ENSG00000281920 Gene

No publications were found for ENSG00000281920 Gene.

No data available for Mastermind for ENSG00000281920 Gene

Products for ENSG00000281920 Gene

Sources for ENSG00000281920 Gene