Aliases for ENSG00000280987 Gene

Aliases for ENSG00000280987 Gene

  • CDNA FLJ10526 Fis, Clone NT2RP2000931, Highly Similar To Matrin-3 13
  • Matrin 3 5
  • Matrin-3 13
  • MATR3 5

External Ids for ENSG00000280987 Gene

Summaries for ENSG00000280987 Gene

GeneCards Summary for ENSG00000280987 Gene

ENSG00000280987 is a Protein Coding gene. An important paralog of this gene is MATR3.

Additional gene information for ENSG00000280987 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000280987 Gene

Genomics for ENSG00000280987 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000280987 Gene

Promoters and enhancers for ENSG00000280987 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000280987 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000280987 Gene

Genomic Locations for ENSG00000280987 Gene
chr5:139,273,752-139,331,671
(GRCh38/hg38)
Size:
57,920 bases
Orientation:
Plus strand

Genomic View for ENSG00000280987 Gene

Genes around ENSG00000280987 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000280987 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000280987 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000280987 Gene

Proteins for ENSG00000280987 Gene

  • Protein details for ENSG00000280987 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    D6RAM9-D6RAM9_HUMAN
    Recommended name:
    Matrin-3
    Protein Accession:
    D6RAM9

    Protein attributes for ENSG00000280987 Gene

    Size:
    81 amino acids
    Molecular mass:
    8709 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000280987 Gene

Post-translational modifications for ENSG00000280987 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000280987 Gene

Domains & Families for ENSG00000280987 Gene

genes like me logo Genes that share domains with ENSG00000280987: view

No data available for Gene Families , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000280987 Gene

Function for ENSG00000280987 Gene

Gene Ontology (GO) - Molecular Function for ENSG00000280987 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003723 RNA binding IEA --
GO:0008270 zinc ion binding IEA --
genes like me logo Genes that share ontologies with ENSG00000280987: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ENSG00000280987 Gene

Localization for ENSG00000280987 Gene

Subcellular locations from the

Human Protein Atlas (HPA)

Gene Ontology (GO) - Cellular Components for ENSG00000280987 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ENSG00000280987: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for ENSG00000280987 Gene

Pathways & Interactions for ENSG00000280987 Gene

PathCards logo

SuperPathways for ENSG00000280987 Gene

No Data Available

Interacting Proteins for ENSG00000280987 Gene

STRING Interaction Network Preview (showing top 5 STRING interactants - click image to see top 25)
STRING Interaction Network
Selected Interacting proteins: ENSP00000354346 for ENSG00000280987 Gene via STRING

;

Gene Ontology (GO) - Biological Process for ENSG00000280987 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000280987 Gene

Drugs & Compounds for ENSG00000280987 Gene

No Compound Related Data Available

Transcripts for ENSG00000280987 Gene

mRNA/cDNA for ENSG00000280987 Gene

11 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000280987 Gene

No ASD Table

Relevant External Links for ENSG00000280987 Gene

GeneLoc Exon Structure for
ENSG00000280987

Expression for ENSG00000280987 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000280987 Gene

Orthologs for ENSG00000280987 Gene

Evolution for ENSG00000280987 Gene

ENSEMBL:
Gene Tree for ENSG00000280987 (if available)
TreeFam:
Gene Tree for ENSG00000280987 (if available)

No data available for Orthologs for ENSG00000280987 Gene

Paralogs for ENSG00000280987 Gene

Paralogs for ENSG00000280987 Gene

Pseudogenes.org Pseudogenes for ENSG00000280987 Gene

genes like me logo Genes that share paralogs with ENSG00000280987: view

Variants for ENSG00000280987 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000280987 Gene

Disorders for ENSG00000280987 Gene

No disorders were found for ENSG00000280987 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000280987 Gene

Publications for ENSG00000280987 Gene

  1. Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation. (PMID: 28112733) Hendriks IA … Nielsen ML (Nature structural & molecular biology 2017) 13 54
  2. N-terminome analysis of the human mitochondrial proteome. (PMID: 25944712) Vaca Jacome AS … Carapito C (Proteomics 2015) 13 54
  3. System-wide Analysis of SUMOylation Dynamics in Response to Replication Stress Reveals Novel Small Ubiquitin-like Modified Target Proteins and Acceptor Lysines Relevant for Genome Stability. (PMID: 25755297) Xiao Z … Vertegaal AC (Molecular & cellular proteomics : MCP 2015) 13 54
  4. SUMO-2 Orchestrates Chromatin Modifiers in Response to DNA Damage. (PMID: 25772364) Hendriks IA … Vertegaal ACO (Cell reports 2015) 13 54
  5. An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome. (PMID: 24275569) Bian Y … Zou H (Journal of proteomics 2014) 13 54

No data available for Mastermind for ENSG00000280987 Gene

Products for ENSG00000280987 Gene

Sources for ENSG00000280987 Gene