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Aliases for ENSG00000280987 Gene

Aliases for ENSG00000280987 Gene

  • Matrin 3 5
  • MATR3 5

External Ids for ENSG00000280987 Gene

Summaries for ENSG00000280987 Gene

GeneCards Summary for ENSG00000280987 Gene

ENSG00000280987 is a Protein Coding gene. An important paralog of this gene is MATR3.

Additional gene information for ENSG00000280987 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000280987 Gene

Genomics for ENSG00000280987 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000280987 Gene

Promoters and enhancers for ENSG00000280987 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I139270 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE 550.8 +1.3 1295 8.2 HDGF HNRNPUL1 PKNOX1 CLOCK FOXA2 MLX ARID4B SIN3A FEZF1 DMAP1 MATR3 ENSG00000280987 SNHG4 SNORA74D KDM3B RPL7P19 SLC23A1 DNAJC18 ETF1 LOC105379194
GH05I139292 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.3 +21.1 21090 3.8 HDGF SMAD1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 POLR2B SIL1 MATR3 PURA KDM3B DNAJC18 GC05P139300 ENSG00000280987 GC05P138946
GH05I139261 Enhancer 1.1 Ensembl ENCODE 0.4 -10.9 -10856 1.9 ARID4B SIN3A ZNF2 ETS1 ZNF766 ZNF213 ZNF207 ZNF143 ATF7 RUNX3 SLC23A1 MATR3 SNHG4 ENSG00000280987 SIL1 RNU6-572P GC05P138946
GH05I139310 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +37.2 37159 0.8 KLF1 ZNF362 GFI1B ZEB2 ZNF2 ZFP69B JUND PRDM6 ZNF366 FOS MATR3 PAIP2 SNORA74A SLC23A1 HSPA9 SNORD63B SNORD63 GC05P139308 PIR61462 RN7SKP64
GH05I139281 Enhancer 0.7 ENCODE 0.4 +7.5 7505 0.2 ZSCAN5A PKNOX1 INSM2 ZNF384 ZNF2 BCL11B POLR2A ZNF600 ZNF280D ZNF362 PIR57006 SNHG4 MATR3 ENSG00000280987 SIL1 GC05P138946
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000280987 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000280987 Gene

Genomic Locations for ENSG00000280987 Gene
chr5:139,273,752-139,331,671
(GRCh38/hg38)
Size:
57,920 bases
Orientation:
Plus strand

Genomic View for ENSG00000280987 Gene

Genes around ENSG00000280987 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000280987 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000280987 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000280987 Gene

Proteins for ENSG00000280987 Gene

  • Protein details for ENSG00000280987 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0R4J2E8
    Recommended name:
    Matrin-3
    Protein Accession:
    A0A0R4J2E8

    Protein attributes for ENSG00000280987 Gene

    Size:
    847 amino acids
    Molecular mass:
    94623 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000280987 Gene

Post-translational modifications for ENSG00000280987 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000280987 Gene

Domains & Families for ENSG00000280987 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ENSG00000280987: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000280987 Gene

Function for ENSG00000280987 Gene

Gene Ontology (GO) - Molecular Function for ENSG00000280987 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003723 RNA binding IEA --
GO:0008270 zinc ion binding IEA --
genes like me logo Genes that share ontologies with ENSG00000280987: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ENSG00000280987 Gene

Localization for ENSG00000280987 Gene

Subcellular locations from the

Human Protein Atlas (HPA)

Gene Ontology (GO) - Cellular Components for ENSG00000280987 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ENSG00000280987: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for ENSG00000280987 Gene

Pathways & Interactions for ENSG00000280987 Gene

SuperPathways for ENSG00000280987 Gene

No Data Available

Interacting Proteins for ENSG00000280987 Gene

Gene Ontology (GO) - Biological Process for ENSG00000280987 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000280987 Gene

Drugs & Compounds for ENSG00000280987 Gene

No Compound Related Data Available

Transcripts for ENSG00000280987 Gene

mRNA/cDNA for ENSG00000280987 Gene

(11) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000280987 Gene

No ASD Table

Relevant External Links for ENSG00000280987 Gene

GeneLoc Exon Structure for
ENSG00000280987

Expression for ENSG00000280987 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000280987 Gene

Orthologs for ENSG00000280987 Gene

Evolution for ENSG00000280987 Gene

ENSEMBL:
Gene Tree for ENSG00000280987 (if available)
TreeFam:
Gene Tree for ENSG00000280987 (if available)

No data available for Orthologs for ENSG00000280987 Gene

Paralogs for ENSG00000280987 Gene

Paralogs for ENSG00000280987 Gene

Pseudogenes.org Pseudogenes for ENSG00000280987 Gene

genes like me logo Genes that share paralogs with ENSG00000280987: view

Variants for ENSG00000280987 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000280987 Gene

Disorders for ENSG00000280987 Gene

No disorders were found for ENSG00000280987 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000280987 Gene

Publications for ENSG00000280987 Gene

No publications were found for ENSG00000280987 Gene.

Products for ENSG00000280987 Gene

Sources for ENSG00000280987 Gene

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