Aliases for ENSG00000280434 Gene

Subcategory (RNA class) for ENSG00000280434 Gene

lncRNA

Number of RNA Genes sources:

0 / 14

Aliases for ENSG00000280434 Gene

  • Novel Transcript, Sense Overlapping PARVB 5
  • AL031595.3 5

External Ids for ENSG00000280434 Gene

Summaries for ENSG00000280434 Gene

GeneCards Summary for ENSG00000280434 Gene

ENSG00000280434 is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for ENSG00000280434 Gene

  • Selenocysteine transfer RNA

Additional gene information for ENSG00000280434 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000280434 Gene

Genomics for ENSG00000280434 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000280434 Gene

Promoters and enhancers for ENSG00000280434 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J044138 Enhancer 0.3 dbSUPER 500.7 -0.2 -210 0.5 ZKSCAN1 ENSG00000280434 piR-58557-058 PARVB
GH22J044139 Enhancer 0.2 dbSUPER 500.7 +1.0 1023 1.8 ENSG00000280434 TRU-TCA2-1 PARVB
GH22J044145 Enhancer 1 ENCODE CraniofacialAtlas dbSUPER 0.4 +8.2 8173 4.7 MYC TEAD4 SAP30 HDAC2 MYNN POLR2A NANOG ZFHX2 POU2F2 MAX ENSG00000220702 PARVG TRU-TCA2-1 ENSG00000280434 PARVB
GH22J044154 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +14.9 14936 1.4 TRIM22 ZNF266 SMC3 CBFB SRF ZNF707 NBN ZFHX2 BMI1 NFATC3 PHF21B PARVG ENSG00000224856 SAMM50 TRU-TCA2-1 HSALNG0135831 ENSG00000280434 PARVB
GH22J044144 Enhancer 0.6 ENCODE dbSUPER 0.7 +4.4 4431 0.2 EP300 SMC3 POLR2A RAD21 ENSG00000220702 ENSG00000280434 TRU-TCA2-1 PARVB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000280434 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000280434 Gene

Genomic Locations for ENSG00000280434 Gene
chr22:44,139,365-44,153,626
(GRCh38/hg38)
Size:
14,262 bases
Orientation:
Plus strand

Genomic View for ENSG00000280434 Gene

Genes around ENSG00000280434 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000280434 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000280434 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000280434 Gene

Proteins for ENSG00000280434 Gene

Post-translational modifications for ENSG00000280434 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000280434 Gene

Domains & Families for ENSG00000280434 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000280434 Gene

Function for ENSG00000280434 Gene

Phenotypes From GWAS Catalog for ENSG00000280434 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000280434 Gene

Localization for ENSG00000280434 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000280434 Gene

Pathways & Interactions for ENSG00000280434 Gene

PathCards logo

SuperPathways for ENSG00000280434 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000280434 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000280434 Gene

Drugs & Compounds for ENSG00000280434 Gene

No Compound Related Data Available

Transcripts for ENSG00000280434 Gene

mRNA/cDNA for ENSG00000280434 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000280434 Gene

No ASD Table

Relevant External Links for ENSG00000280434 Gene

GeneLoc Exon Structure for
ENSG00000280434

Expression for ENSG00000280434 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000280434 Gene

Orthologs for ENSG00000280434 Gene

Evolution for ENSG00000280434 Gene

ENSEMBL:
Gene Tree for ENSG00000280434 (if available)
TreeFam:
Gene Tree for ENSG00000280434 (if available)

No data available for Orthologs for ENSG00000280434 Gene

Paralogs for ENSG00000280434 Gene

No data available for Paralogs for ENSG00000280434 Gene

Variants for ENSG00000280434 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000280434 Gene

Disorders for ENSG00000280434 Gene

No disorders were found for ENSG00000280434 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000280434 Gene

Publications for ENSG00000280434 Gene

No publications were found for ENSG00000280434 Gene.

No data available for Mastermind for ENSG00000280434 Gene

Products for ENSG00000280434 Gene

Sources for ENSG00000280434 Gene