Aliases for ENSG00000279686 Gene

Aliases for ENSG00000279686 Gene

  • Novel Transcript 5
  • AC142391.1 5

External Ids for ENSG00000279686 Gene

Summaries for ENSG00000279686 Gene

GeneCards Summary for ENSG00000279686 Gene

ENSG00000279686 is a Protein Coding gene. An important paralog of this gene is ECSCR.

Additional gene information for ENSG00000279686 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000279686 Gene

Genomics for ENSG00000279686 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000279686 Gene

Promoters and enhancers for ENSG00000279686 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J139464 Enhancer 0.3 Ensembl 500.7 -1.8 -1793 0.6 ZNF362 ECSCR ENSG00000279686 RF00017-4940 RF00017-4941 RF00017-4936
GH05J139457 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 +2.3 2267 5.6 TEAD4 ZIC2 TEAD1 RBM25 BCL11A ZNF585B ESRRA TCF12 FOXA2 CBFB ECSCR DNAJC18 STING1 ENSG00000279686 RF00020-024 RNU5B-4P RF00017-4936
GH05J139443 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +17.4 17449 5.3 EP300 SP1 JUND RELA MEF2C TRIM22 MXI1 BCL11A SALL2 WT1 DNAJC18 lnc-ECSCR-1 IGIP MATR3 LRRTM2 PURA MALINC1 RF00020-024 RNU5B-4P ENSG00000279686
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000279686 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000279686 Gene

Genomic Locations for ENSG00000279686 Gene
chr5:139,442,316-139,462,707
(GRCh38/hg38)
Size:
20,392 bases
Orientation:
Minus strand

Genomic View for ENSG00000279686 Gene

Genes around ENSG00000279686 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000279686 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000279686 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000279686 Gene

Proteins for ENSG00000279686 Gene

Post-translational modifications for ENSG00000279686 Gene

No Post-translational modifications

Other Protein References for ENSG00000279686 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000279686 Gene

Domains & Families for ENSG00000279686 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000279686 Gene

Function for ENSG00000279686 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000279686 Gene

Localization for ENSG00000279686 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000279686 Gene

Pathways & Interactions for ENSG00000279686 Gene

PathCards logo

SuperPathways for ENSG00000279686 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000279686 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000279686 Gene

Drugs & Compounds for ENSG00000279686 Gene

No Compound Related Data Available

Transcripts for ENSG00000279686 Gene

mRNA/cDNA for ENSG00000279686 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000279686 Gene

No ASD Table

Relevant External Links for ENSG00000279686 Gene

GeneLoc Exon Structure for
ENSG00000279686

Expression for ENSG00000279686 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000279686 Gene

Orthologs for ENSG00000279686 Gene

Evolution for ENSG00000279686 Gene

ENSEMBL:
Gene Tree for ENSG00000279686 (if available)
TreeFam:
Gene Tree for ENSG00000279686 (if available)

No data available for Orthologs for ENSG00000279686 Gene

Paralogs for ENSG00000279686 Gene

Paralogs for ENSG00000279686 Gene

genes like me logo Genes that share paralogs with ENSG00000279686: view

Variants for ENSG00000279686 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000279686 Gene

Disorders for ENSG00000279686 Gene

No disorders were found for ENSG00000279686 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000279686 Gene

Publications for ENSG00000279686 Gene

No publications were found for ENSG00000279686 Gene.

No data available for Mastermind for ENSG00000279686 Gene

Products for ENSG00000279686 Gene

Sources for ENSG00000279686 Gene