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Aliases for ENSG00000279656 Gene

Subcategory (RNA class) for ENSG00000279656 Gene

lncRNA

Aliases for ENSG00000279656 Gene

  • AL132780.4 5

External Ids for ENSG00000279656 Gene

ORGUL Members for ENSG00000279656 Gene

Summaries for ENSG00000279656 Gene

GeneCards Summary for ENSG00000279656 Gene

ENSG00000279656 is an Uncategorized gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for ENSG00000279656 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for ENSG00000279656

Additional gene information for ENSG00000279656 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000279656 Gene

Genomics for ENSG00000279656 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000279656 Gene

Promoters and enhancers for ENSG00000279656 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J023024 Enhancer 1 ENCODE dbSUPER 650.7 -1.3 -1337 1.5 PKNOX1 KLF17 FEZF1 ZNF2 TCF12 POLR2B EGR1 IKZF2 EGR2 ZNF398 ENSG00000279656 HAUS4 PSMB5
GH14J023033 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.4 -10.5 -10491 2.8 PKNOX1 SMAD1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 IRF4 YY1 PSMB5 ACIN1 RBM23 HAUS4 NGDN PRMT5 LOC102724814 PABPN1 HOMEZ C14orf93
GH14J023020 Enhancer 1 ENCODE dbSUPER 0.7 +3.2 3230 0.2 HDAC1 ATF1 TCF12 GATA2 EGR1 CREM ZBTB2 GATAD2B ZEB2 MBD2 ENSG00000279656 GC14M023017 PSMB5
GH14J023021 Enhancer 0.9 ENCODE dbSUPER 0.7 +3.5 3535 0.2 HDAC1 TCF12 ZNF664 CCNT2 GATA2 EGR1 FOXK2 TRIM24 PRDM10 CREM HAUS4 ENSG00000279656 GC14M023017 PSMB5
GH14J023028 Enhancer 0.5 ENCODE 0.7 -4.7 -4741 1.2 OSR2 POLR2A FOXK2 ZBTB33 ZNF600 ZBTB17 ENSG00000279656 PSMB5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000279656 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000279656 Gene

Genomic Locations for ENSG00000279656 Gene
chr14:23,023,083-23,024,217
(GRCh38/hg38)
Size:
1,135 bases
Orientation:
Minus strand

Genomic View for ENSG00000279656 Gene

Genes around ENSG00000279656 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000279656 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000279656 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for ENSG00000279656 Gene

ORGUL Member Location for ENSG00000279656 gene

No data available for RefSeq DNA sequence for ENSG00000279656 Gene

Proteins for ENSG00000279656 Gene

Post-translational modifications for ENSG00000279656 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000279656 Gene

Domains & Families for ENSG00000279656 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000279656 Gene

Function for ENSG00000279656 Gene

Phenotypes From GWAS Catalog for ENSG00000279656 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000279656 Gene

Localization for ENSG00000279656 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000279656 Gene

Pathways & Interactions for ENSG00000279656 Gene

SuperPathways for ENSG00000279656 Gene

No Data Available

Interacting Proteins for ENSG00000279656 Gene

Gene Ontology (GO) - Biological Process for ENSG00000279656 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000279656 Gene

Drugs & Compounds for ENSG00000279656 Gene

No Compound Related Data Available

Transcripts for ENSG00000279656 Gene

fRNAdb Secondary structures for ENSG00000279656 Gene

  • FR319661

mRNA/cDNA for ENSG00000279656 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000279656 Gene

No ASD Table

Relevant External Links for ENSG00000279656 Gene

GeneLoc Exon Structure for
ENSG00000279656

Expression for ENSG00000279656 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000279656 Gene

Orthologs for ENSG00000279656 Gene

Evolution for ENSG00000279656 Gene

ENSEMBL:
Gene Tree for ENSG00000279656 (if available)
TreeFam:
Gene Tree for ENSG00000279656 (if available)

No data available for Orthologs for ENSG00000279656 Gene

Paralogs for ENSG00000279656 Gene

No data available for Paralogs for ENSG00000279656 Gene

Variants for ENSG00000279656 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000279656 Gene

Disorders for ENSG00000279656 Gene

No disorders were found for ENSG00000279656 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000279656 Gene

Publications for ENSG00000279656 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for ENSG00000279656 Gene

Sources for ENSG00000279656 Gene

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