Aliases for ENSG00000279549 Gene

Aliases for ENSG00000279549 Gene

  • Novel Transcript 5
  • AP000437.1 5

External Ids for ENSG00000279549 Gene

Summaries for ENSG00000279549 Gene

GeneCards Summary for ENSG00000279549 Gene

ENSG00000279549 is an Uncategorized gene.

Additional gene information for ENSG00000279549 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000279549 Gene

Genomics for ENSG00000279549 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000279549 Gene

Promoters and enhancers for ENSG00000279549 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J061146 Enhancer 0.4 ENCODE dbSUPER 750.6 -1.6 -1638 1.4 SCRT2 ENSG00000279549 piR-43655 CD5 CD6 SDHAF2 VPS37C lnc-VWCE-2
GH11J061145 Enhancer 0.4 dbSUPER 750.6 -0.2 -154 1 ZFHX2 KDM1A ADNP SMARCA5 ENSG00000279549 piR-43655 CD5 VPS37C lnc-VWCE-2
GH11J061141 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.6 +4.8 4763 5.4 LCORL NFIB MAFK GLIS2 ZIC2 PKNOX1 ZNF316 GTF2F1 POLR2A SMARCA5 CD5 VPS37C RNU6-933P VWCE ENSG00000279549 lnc-VWCE-2
GH11J061128 Enhancer 1.3 ENCODE CraniofacialAtlas dbSUPER 0.4 +14.5 14463 4.2 CTCF RBPJ POLR2A MIXL1 CC2D1A NFYC L3MBTL2 MAX RAD21 MNT CD5 CPSF7 CD6 RNU6-933P RN7SL23P TMEM138 ENSG00000279549 VPS37C
GH11J061101 Promoter/Enhancer 1.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +42.1 42059 4 CDC5L NFRKB ZSCAN4 HES1 FOXK2 MNT SCRT2 HDGF BCOR ZNF18 CD5 CD6 RNU6-933P VPS37C SDHAF2 ENSG00000279549
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000279549 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000279549 Gene

Genomic Locations for ENSG00000279549 Gene
chr11:61,143,380-61,145,464
(GRCh38/hg38)
Size:
2,085 bases
Orientation:
Minus strand

Genomic View for ENSG00000279549 Gene

Genes around ENSG00000279549 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000279549 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000279549 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000279549 Gene

Proteins for ENSG00000279549 Gene

Post-translational modifications for ENSG00000279549 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000279549 Gene

Domains & Families for ENSG00000279549 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000279549 Gene

Function for ENSG00000279549 Gene

Phenotypes From GWAS Catalog for ENSG00000279549 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000279549 Gene

Localization for ENSG00000279549 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000279549 Gene

Pathways & Interactions for ENSG00000279549 Gene

PathCards logo

SuperPathways for ENSG00000279549 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000279549 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000279549 Gene

Drugs & Compounds for ENSG00000279549 Gene

No Compound Related Data Available

Transcripts for ENSG00000279549 Gene

mRNA/cDNA for ENSG00000279549 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000279549 Gene

No ASD Table

Relevant External Links for ENSG00000279549 Gene

GeneLoc Exon Structure for
ENSG00000279549

Expression for ENSG00000279549 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000279549 Gene

Orthologs for ENSG00000279549 Gene

Evolution for ENSG00000279549 Gene

ENSEMBL:
Gene Tree for ENSG00000279549 (if available)
TreeFam:
Gene Tree for ENSG00000279549 (if available)

No data available for Orthologs for ENSG00000279549 Gene

Paralogs for ENSG00000279549 Gene

No data available for Paralogs for ENSG00000279549 Gene

Variants for ENSG00000279549 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000279549 Gene

Disorders for ENSG00000279549 Gene

No disorders were found for ENSG00000279549 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000279549 Gene

Publications for ENSG00000279549 Gene

No publications were found for ENSG00000279549 Gene.

No data available for External Links for ENSG00000279549 Gene

Products for ENSG00000279549 Gene

Sources for ENSG00000279549 Gene