Aliases for ENSG00000279459 Gene

Aliases for ENSG00000279459 Gene

  • AP001271.2 5
  • TEC 5

External Ids for ENSG00000279459 Gene

Summaries for ENSG00000279459 Gene

GeneCards Summary for ENSG00000279459 Gene

ENSG00000279459 is an Uncategorized gene.

Additional gene information for ENSG00000279459 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000279459 Gene

Genomics for ENSG00000279459 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000279459 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J070603 Enhancer 0.6 Ensembl ENCODE 250.7 +1.2 1165 2.7 ZMYM3 EZH2 BCOR ENSG00000279459 lnc-CTTN-9 SHANK2-AS2 SHANK2-AS1 CTTN SHANK2
GH11J070602 Enhancer 0.2 Ensembl 250.7 -1.0 -1003 0.6 ENSG00000279459 HQ292114 lnc-CTTN-9 SHANK2-AS2 CTTN SHANK2
GH11J070607 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 0.4 +7.0 6997 5.4 ZIC2 CEBPB L3MBTL2 EZH2 POLR2A USF1 SCRT2 ENSG00000279459 SHANK2-AS1 CTTN SHANK2
GH11J070616 Enhancer 0.8 Ensembl CraniofacialAtlas 0.4 +14.0 13997 0.6 PLRG1 HES1 CTBP1 NONO TEAD3 YBX1 ZNF512B ZBTB40 ARNT NFATC1 CTTN LTO1 SHANK2-AS1 ENSG00000279459 SHANK2
GH11J070626 Enhancer 0.6 FANTOM5 Ensembl 0.4 +22.3 22297 2 RFX1 PKNOX1 SHANK2-AS1 SHANK2 ENSG00000279459 CTTN
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000279459 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000279459 Gene

Latest Assembly
chr11:70,603,304-70,604,859
(GRCh38/hg38)
Size:
1,556 bases
Orientation:
Plus strand

Genomic View for ENSG00000279459 Gene

Genes around ENSG00000279459 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000279459 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000279459 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000279459 Gene

Proteins for ENSG00000279459 Gene

Post-translational modifications for ENSG00000279459 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000279459 Gene

Domains & Families for ENSG00000279459 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000279459 Gene

Function for ENSG00000279459 Gene

miRNA for ENSG00000279459 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ENSG00000279459 Gene

Localization for ENSG00000279459 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000279459 Gene

Pathways & Interactions for ENSG00000279459 Gene

PathCards logo

SuperPathways for ENSG00000279459 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000279459 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000279459 Gene

Drugs & Compounds for ENSG00000279459 Gene

No Compound Related Data Available

Transcripts for ENSG00000279459 Gene

mRNA/cDNA for ENSG00000279459 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000279459 Gene

No ASD Table

Relevant External Links for ENSG00000279459 Gene

GeneLoc Exon Structure for
ENSG00000279459

Expression for ENSG00000279459 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000279459 Gene

Orthologs for ENSG00000279459 Gene

Evolution for ENSG00000279459 Gene

ENSEMBL:
Gene Tree for ENSG00000279459 (if available)
TreeFam:
Gene Tree for ENSG00000279459 (if available)

No data available for Orthologs for ENSG00000279459 Gene

Paralogs for ENSG00000279459 Gene

No data available for Paralogs for ENSG00000279459 Gene

Variants for ENSG00000279459 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000279459 Gene

Disorders for ENSG00000279459 Gene

No disorders were found for ENSG00000279459 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000279459 Gene

Publications for ENSG00000279459 Gene

No publications were found for ENSG00000279459 Gene.

No data available for Mastermind for ENSG00000279459 Gene

Products for ENSG00000279459 Gene

Sources for ENSG00000279459 Gene