Aliases for ENSG00000279006 Gene

Subcategory (RNA class) for ENSG00000279006 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for ENSG00000279006 Gene

  • Novel Transcript 5
  • Lnc-TMEM211-6 165
  • AL022323.1 5

External Ids for ENSG00000279006 Gene

Summaries for ENSG00000279006 Gene

GeneCards Summary for ENSG00000279006 Gene

ENSG00000279006 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000279006 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000279006 Gene

Genomics for ENSG00000279006 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000279006 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J025049 Enhancer 1 Ensembl ENCODE 600.7 -1.7 -1669 8.6 HNRNPL GATAD2A CTCF ZNF629 TFE3 KDM1A RCOR2 LARP7 PRDM1 ZNF143 ENSG00000279006 piR-43104-037 SNRPD3 TMEM211 KIAA1671 ENSG00000279110 CRYBB3
GH22J025048 Enhancer 0.7 ENCODE 0.7 +3.1 3077 0.2 CTCF ZBTB33 TEAD4 KDM1A ZNF143 REST RAD21 IRF2 TRIM22 ZKSCAN8 TMEM211 ENSG00000279006 piR-35911 KIAA1671 CRYBB3
GH22J025043 Enhancer 0.2 Ensembl 0.4 +8.4 8365 0.4 TMEM211 piR-35911 ENSG00000279006 KIAA1671 CRYBB3
GH22J025042 Enhancer 0.2 Ensembl 0.4 +9.2 9165 0.4 piR-35911 piR-31268 TMEM211 ENSG00000279006 KIAA1671 CRYBB3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000279006 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000279006 Gene

Genomic Locations for ENSG00000279006 Gene
chr22:25,048,967-25,051,966
(GRCh38/hg38)
Size:
3,000 bases
Orientation:
Minus strand

Genomic View for ENSG00000279006 Gene

Genes around ENSG00000279006 on UCSC Golden Path with GeneCards custom track
ENSG00000279006 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000279006 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000279006 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000279006 Gene

Proteins for ENSG00000279006 Gene

Post-translational modifications for ENSG00000279006 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000279006 Gene

Domains & Families for ENSG00000279006 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000279006 Gene

Function for ENSG00000279006 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000279006 Gene

Localization for ENSG00000279006 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000279006 Gene

Pathways & Interactions for ENSG00000279006 Gene

PathCards logo

SuperPathways for ENSG00000279006 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000279006 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000279006 Gene

Drugs & Compounds for ENSG00000279006 Gene

No Compound Related Data Available

Transcripts for ENSG00000279006 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000279006 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00007D18B1_9606 lncRNA 3000 2

Ensembl: ENST00000623239 (view in UCSC) ,

LNCipedia: lnc-TMEM211-6:1,

ENSG00000279006 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000279006 Gene

No ASD Table

Relevant External Links for ENSG00000279006 Gene

GeneLoc Exon Structure for
ENSG00000279006

No data available for mRNA/cDNA for ENSG00000279006 Gene

Expression for ENSG00000279006 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000279006 Gene

Orthologs for ENSG00000279006 Gene

Evolution for ENSG00000279006 Gene

ENSEMBL:
Gene Tree for ENSG00000279006 (if available)
TreeFam:
Gene Tree for ENSG00000279006 (if available)

No data available for Orthologs for ENSG00000279006 Gene

Paralogs for ENSG00000279006 Gene

No data available for Paralogs for ENSG00000279006 Gene

Variants for ENSG00000279006 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000279006 Gene

Disorders for ENSG00000279006 Gene

Additional Disease Information for ENSG00000279006

No disorders were found for ENSG00000279006 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000279006 Gene

Publications for ENSG00000279006 Gene

No publications were found for ENSG00000279006 Gene.

No data available for Mastermind for ENSG00000279006 Gene

Products for ENSG00000279006 Gene

Sources for ENSG00000279006 Gene