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Aliases for ENSG00000278954 Gene

Subcategory (RNA class) for ENSG00000278954 Gene

lncRNA

Aliases for ENSG00000278954 Gene

  • AC130686.1 5

External Ids for ENSG00000278954 Gene

ORGUL Members for ENSG00000278954 Gene

Summaries for ENSG00000278954 Gene

GeneCards Summary for ENSG00000278954 Gene

ENSG00000278954 is an Uncategorized gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000278954 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000278954 Gene

Genomics for ENSG00000278954 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000278954 Gene

Promoters and enhancers for ENSG00000278954 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J041664 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 650.7 +1.1 1101 3.6 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ENSG00000278954 GC17M041665 HAP1 ZNF385C
GH17J041662 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.7 -2.1 -2127 2.1 MLX ARNT ARID4B SIN3A ZNF2 ZNF213 ZNF207 ZNF143 KLF13 DEK LINC00974 ENSG00000278954 KRT42P
GH17J041649 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -10.9 -10920 9.8 HDGF ARNT ZNF133 NEUROD1 YBX1 BRCA1 TCF12 GLIS2 ZNF143 ZNF207 ENSG00000267758 JUP HSD17B1 DHX58 GHDC ENSG00000259623 KRT14 CNP PSMC3IP RETREG3
GH17J041645 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -19.7 -19681 1.3 HDAC1 HDGF ATF1 NFRKB ARID2 ATF7 CREM SMARCC1 ZNF592 MAFF EIF1 C17orf113 DHX58 NKIRAS2 KRT42P ENSG00000278954
GH17J041647 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -17.1 -17070 2.2 HDGF ARID4B SIN3A GLI4 ZNF121 GLIS2 ARID2 ZNF143 NCOA1 REST KRTAP9-2 LOC105371776 RETREG3 DHX58 ENSG00000236194 HAP1 KRT42P ENSG00000278954
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000278954 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000278954 Gene

Genomic Locations for ENSG00000278954 Gene
chr17:41,665,566-41,668,031
(GRCh38/hg38)
Size:
2,466 bases
Orientation:
Plus strand

Genomic View for ENSG00000278954 Gene

Genes around ENSG00000278954 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000278954 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000278954 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000278954 Gene

Proteins for ENSG00000278954 Gene

Post-translational modifications for ENSG00000278954 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000278954 Gene

Domains & Families for ENSG00000278954 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000278954 Gene

Function for ENSG00000278954 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000278954 Gene

Localization for ENSG00000278954 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000278954 Gene

Pathways & Interactions for ENSG00000278954 Gene

SuperPathways for ENSG00000278954 Gene

No Data Available

Interacting Proteins for ENSG00000278954 Gene

Gene Ontology (GO) - Biological Process for ENSG00000278954 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000278954 Gene

Drugs & Compounds for ENSG00000278954 Gene

No Compound Related Data Available

Transcripts for ENSG00000278954 Gene

mRNA/cDNA for ENSG00000278954 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000278954 Gene

No ASD Table

Relevant External Links for ENSG00000278954 Gene

GeneLoc Exon Structure for
ENSG00000278954

Expression for ENSG00000278954 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000278954 Gene

Orthologs for ENSG00000278954 Gene

Evolution for ENSG00000278954 Gene

ENSEMBL:
Gene Tree for ENSG00000278954 (if available)
TreeFam:
Gene Tree for ENSG00000278954 (if available)

No data available for Orthologs for ENSG00000278954 Gene

Paralogs for ENSG00000278954 Gene

No data available for Paralogs for ENSG00000278954 Gene

Variants for ENSG00000278954 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000278954 Gene

Disorders for ENSG00000278954 Gene

No disorders were found for ENSG00000278954 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000278954 Gene

Publications for ENSG00000278954 Gene

No publications were found for ENSG00000278954 Gene.

Products for ENSG00000278954 Gene

Sources for ENSG00000278954 Gene

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