Aliases for ENSG00000278953 Gene

Aliases for ENSG00000278953 Gene

  • Novel Transcript 5
  • AP003499.5 5

External Ids for ENSG00000278953 Gene

Summaries for ENSG00000278953 Gene

GeneCards Summary for ENSG00000278953 Gene

ENSG00000278953 is an Uncategorized gene.

Additional gene information for ENSG00000278953 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000278953 Gene

Genomics for ENSG00000278953 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000278953 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J093591 Enhancer 1 Ensembl ENCODE 600.7 -0.3 -286 1.8 GATAD2A RCOR2 JUND RXRB PKNOX1 CEBPA NRF1 SOX13 RUNX3 FOXA2 ENSG00000278953 SMCO4 TAF1D ENSG00000279454 CEP295
GH11J093608 Enhancer 0.7 Ensembl ENCODE 0.4 +16.1 16114 3 PKNOX1 HMBOX1 ZNF157 FOXA2 FOSL1 ZNF189 SPI1 C11orf54 TAF1D ENSG00000255515 LOC642897 lnc-SMCO4-2 ENSG00000278953 SMCO4 CEP295
GH11J093603 Enhancer 0.4 Ensembl 0.4 +12.7 12714 3.4 ZNF512 POLR2A ZNF366 ZMYM3 C11orf54 SMCO4 TAF1D ENSG00000255515 lnc-SMCO4-2 ENSG00000278953 CEP295
GH11J093588 Enhancer 0.2 ENCODE 0.7 -2.9 -2854 0.9 ENSG00000279454 SMCO4 ENSG00000278953 CEP295
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000278953 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000278953 Gene

Genomic Locations for ENSG00000278953 Gene
chr11:93,592,187-93,592,669
(GRCh38/hg38)
Size:
483 bases
Orientation:
Plus strand

Genomic View for ENSG00000278953 Gene

Genes around ENSG00000278953 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000278953 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000278953 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000278953 Gene

Proteins for ENSG00000278953 Gene

Post-translational modifications for ENSG00000278953 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000278953 Gene

Domains & Families for ENSG00000278953 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000278953 Gene

Function for ENSG00000278953 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000278953 Gene

Localization for ENSG00000278953 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000278953 Gene

Pathways & Interactions for ENSG00000278953 Gene

PathCards logo

SuperPathways for ENSG00000278953 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000278953 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000278953 Gene

Drugs & Compounds for ENSG00000278953 Gene

No Compound Related Data Available

Transcripts for ENSG00000278953 Gene

mRNA/cDNA for ENSG00000278953 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000278953 Gene

No ASD Table

Relevant External Links for ENSG00000278953 Gene

GeneLoc Exon Structure for
ENSG00000278953

Expression for ENSG00000278953 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000278953 Gene

Orthologs for ENSG00000278953 Gene

Evolution for ENSG00000278953 Gene

ENSEMBL:
Gene Tree for ENSG00000278953 (if available)
TreeFam:
Gene Tree for ENSG00000278953 (if available)

No data available for Orthologs for ENSG00000278953 Gene

Paralogs for ENSG00000278953 Gene

No data available for Paralogs for ENSG00000278953 Gene

Variants for ENSG00000278953 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000278953 Gene

Disorders for ENSG00000278953 Gene

Additional Disease Information for ENSG00000278953

No disorders were found for ENSG00000278953 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000278953 Gene

Publications for ENSG00000278953 Gene

No publications were found for ENSG00000278953 Gene.

No data available for Mastermind for ENSG00000278953 Gene

Products for ENSG00000278953 Gene

Sources for ENSG00000278953 Gene