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Aliases for ENSG00000278887 Gene

Aliases for ENSG00000278887 Gene

  • SLX1 Structure-Specific Endonuclease Subunit Homolog A (S. Cerevisiae) (SLX1A) Pseudogene 5
  • AC106782.7 5

External Ids for ENSG00000278887 Gene

Previous GeneCards Identifiers for ENSG00000278887 Gene

  • GC16P030214
  • GC16P030220
  • GC16P030277
  • GC16P030223
  • GC16P030236
  • GC16P030243
  • GC16P030248
  • GC16P030253
  • GC16P030261
  • GC16P030266
  • GC16P030271

Summaries for ENSG00000278887 Gene

GeneCards Summary for ENSG00000278887 Gene

ENSG00000278887 is a Pseudogene.

Additional gene information for ENSG00000278887 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000278887 Gene

Genomics for ENSG00000278887 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000278887 Gene

Promoters and enhancers for ENSG00000278887 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J030205 Promoter/Enhancer 1 Ensembl dbSUPER 600.7 +0.9 883 2.2 ELF1 ZNF335 KDM1A FOS ENSG00000278887 LOC613038 PIR44576 ENSG00000258130
GH16J030203 Enhancer 0.2 dbSUPER 600.7 -1.1 -1076 1 ENSG00000278887 PIR44576 ENSG00000258130 LOC613038 SULT1A3 SLX1A-SULT1A3
GH16J030199 Promoter/Enhancer 1.2 EPDnew Ensembl dbSUPER 0.4 -6.0 -6017 0.8 SULT1A3 GC16P030195 ENSG00000278887 SLX1A-SULT1A3
GH16J030200 Promoter/Enhancer 0.7 EPDnew dbSUPER 0.7 -4.7 -4657 0.1 SULT1A3 ENSG00000278887 GC16P030195 SLX1A-SULT1A3
GH16J030204 Promoter/Enhancer 0.7 EPDnew dbSUPER 0.4 -5.6 -5584 0.1 SULT1A3 GC16P030195 ENSG00000278887 SLX1A-SULT1A3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000278887 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000278887 Gene

Genomic Locations for ENSG00000278887 Gene
chr16:30,205,418-30,206,927
(GRCh38/hg38)
Size:
1,510 bases
Orientation:
Plus strand
chr16:30,235,536-30,237,016
(GRCh37/hg19)
Size:
1,481 bases
Orientation:
Plus strand

Genomic View for ENSG00000278887 Gene

Genes around ENSG00000278887 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000278887 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000278887 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000278887 Gene

Proteins for ENSG00000278887 Gene

Post-translational modifications for ENSG00000278887 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000278887 Gene

Domains & Families for ENSG00000278887 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000278887 Gene

Function for ENSG00000278887 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000278887 Gene

Localization for ENSG00000278887 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000278887 Gene

Pathways & Interactions for ENSG00000278887 Gene

PathCards logo

SuperPathways for ENSG00000278887 Gene

No Data Available

Interacting Proteins for ENSG00000278887 Gene

Gene Ontology (GO) - Biological Process for ENSG00000278887 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000278887 Gene

Drugs & Compounds for ENSG00000278887 Gene

No Compound Related Data Available

Transcripts for ENSG00000278887 Gene

mRNA/cDNA for ENSG00000278887 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000278887 Gene

No ASD Table

Relevant External Links for ENSG00000278887 Gene

GeneLoc Exon Structure for
ENSG00000278887

Expression for ENSG00000278887 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000278887 Gene

Orthologs for ENSG00000278887 Gene

Evolution for ENSG00000278887 Gene

ENSEMBL:
Gene Tree for ENSG00000278887 (if available)
TreeFam:
Gene Tree for ENSG00000278887 (if available)

No data available for Orthologs for ENSG00000278887 Gene

Paralogs for ENSG00000278887 Gene

No data available for Paralogs for ENSG00000278887 Gene

Variants for ENSG00000278887 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000278887 Gene

Disorders for ENSG00000278887 Gene

No disorders were found for ENSG00000278887 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000278887 Gene

Publications for ENSG00000278887 Gene

No publications were found for ENSG00000278887 Gene.

No data available for External Links for ENSG00000278887 Gene

Products for ENSG00000278887 Gene

Sources for ENSG00000278887 Gene

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