Aliases for ENSG00000278467 Gene

Data sources for ENSG00000278467 Gene:

Subcategory (RNA class) for ENSG00000278467 Gene

lncRNA

Aliases for ENSG00000278467 Gene

External Ids for ENSG00000278467 Gene

Previous GeneCards Identifiers for ENSG00000278467 Gene

  • GC01P223994

Summaries for ENSG00000278467 Gene

GeneCards Summary for ENSG00000278467 Gene

ENSG00000278467 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000278467 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000278467 Gene

Genomics for ENSG00000278467 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000278467 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J223991 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas 250.7 +0.5 471 3.6 ZSCAN16 TBP ZBTB10 SP1 CEBPA MNT IKZF1 SMAD5 ETS1 MBD2 GTF2IP20 SEPTIN7P13 ENSG00000278467 HSALNG0010927 lnc-TP53BP2-8 piR-60253-002 NVL CICP5 WDR26 CAPN2
GH01J224003 Enhancer 0.6 Ensembl 0.4 +11.5 11471 1.6 CTCF RAD21 ZNF146 ZNF384 ARNT NFIL3 ARID2 HLF ZNF280D KDM1A GTF2IP20 HSALNG0010927 MN309048 SEPTIN7P13 ENSG00000278467 FBXO28 TP53BP2
GH01J223998 Enhancer 0.5 Ensembl 0.4 +6.6 6581 1.8 IKZF1 SUPT5H ZEB2 PRDM10 PRDM1 GTF2IP20 HSALNG0010927 ENSG00000278467 SEPTIN7P13 MN309048 FBXO28 TP53BP2
GH01J224001 Enhancer 0.3 Ensembl 0.4 +9.0 8971 0.6 PRDM6 OSR2 HSALNG0010927 ENSG00000278467 SEPTIN7P13 MN309048 FBXO28 TP53BP2
GH01J223995 Enhancer 0.2 Ensembl 0.7 +3.3 3271 0.4 HSALNG0010927 GTF2IP20 ENSG00000278467 SEPTIN7P13 MN309048 FBXO28 TP53BP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000278467 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000278467 Gene

Latest Assembly
chr1:223,992,730-224,033,859
(GRCh38/hg38)
Size:
41,130 bases
Orientation:
Plus strand

Genomic View for ENSG00000278467 Gene

Genes around ENSG00000278467 on UCSC Golden Path with GeneCards custom track
ENSG00000278467 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000278467 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000278467 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000278467 Gene

Proteins for ENSG00000278467 Gene

Post-translational modifications for ENSG00000278467 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000278467 Gene

Domains & Families for ENSG00000278467 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000278467 Gene

Function for ENSG00000278467 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000278467 Gene

Localization for ENSG00000278467 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000278467 Gene

Pathways & Interactions for ENSG00000278467 Gene

PathCards logo

SuperPathways for ENSG00000278467 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000278467 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000278467 Gene

Drugs & Compounds for ENSG00000278467 Gene

No Compound Related Data Available

Transcripts for ENSG00000278467 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000278467 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000077828A_9606 lncRNA 573 3

Ensembl: ENST00000618397 (view in UCSC) ,

LncBook: HSALNT0022782,

LNCipedia: lnc-FBXO28-1:15,

URS00008B47D3_9606 lncRNA 2672 3

LncBook: HSALNT0022784,

LNCipedia: lnc-FBXO28-1:8,

NONCODE: NONHSAT009763.2,

URS00008C2D0B_9606 lncRNA 1038 3

LncBook: HSALNT0022777,

LNCipedia: lnc-FBXO28-1:4,

NONCODE: NONHSAT009758.2,

URS00008B5FA0_9606 lncRNA 454 3

LncBook: HSALNT0022779,

LNCipedia: lnc-FBXO28-1:6,

NONCODE: NONHSAT009760.2,

URS00008B208D_9606 lncRNA 370 3

LncBook: HSALNT0022785,

LNCipedia: lnc-FBXO28-1:9,

NONCODE: NONHSAT009764.2,

ENSG00000278467 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000278467 Gene

No ASD Table

Relevant External Links for ENSG00000278467 Gene

GeneLoc Exon Structure for
ENSG00000278467

No data available for mRNA/cDNA for ENSG00000278467 Gene

Expression for ENSG00000278467 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000278467 Gene

Orthologs for ENSG00000278467 Gene

Evolution for ENSG00000278467 Gene

ENSEMBL:
Gene Tree for ENSG00000278467 (if available)
TreeFam:
Gene Tree for ENSG00000278467 (if available)

No data available for Orthologs for ENSG00000278467 Gene

Paralogs for ENSG00000278467 Gene

No data available for Paralogs for ENSG00000278467 Gene

Variants for ENSG00000278467 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000278467 Gene

Disorders for ENSG00000278467 Gene

No disorders were found for ENSG00000278467 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000278467 Gene

Publications for ENSG00000278467 Gene

No publications were found for ENSG00000278467 Gene.

No data available for Mastermind for ENSG00000278467 Gene

Products for ENSG00000278467 Gene

Sources for ENSG00000278467 Gene