Aliases for ENSG00000278454 Gene

Subcategory (RNA class) for ENSG00000278454 Gene

misc_RNA

Number of RNA Genes sources:

0 / 14

Aliases for ENSG00000278454 Gene

  • AC015599.3 5

External Ids for ENSG00000278454 Gene

Summaries for ENSG00000278454 Gene

GeneCards Summary for ENSG00000278454 Gene

ENSG00000278454 is an RNA Gene, and is affiliated with the misc_RNA class.

Rfam classification for ENSG00000278454 Gene

  • ZFAT antisense RNA 1 conserved region 3

Additional gene information for ENSG00000278454 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000278454 Gene

Genomics for ENSG00000278454 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000278454 Gene

Promoters and enhancers for ENSG00000278454 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J134600 Enhancer 1 Ensembl ENCODE 500.7 +1.4 1440 3 SP1 TCF7 CTCF RELA MEF2C RAD21 REST SKI TRIM22 POLR2A ENSG00000278454 ZFAT-AS1 lnc-ST3GAL1-7 ZFAT
GH08J134597 Enhancer 0.8 Ensembl ENCODE 500.7 -1.5 -1470 2.7 ZBTB40 POLR2A TCF12 MEF2B CHD1 SPI1 WRNIP1 EBF1 STAT1 MITF ENSG00000276140 ENSG00000277732 ENSG00000278454 ZFAT-AS1 ZFAT
GH08J134613 Enhancer 1 Ensembl ENCODE 0.4 +14.0 14045 0.9 EP300 FOXK2 NCOR1 KDM6A FOXA1 ZBTB25 TGIF2 SKI TEAD1 ZBTB26 ENSG00000278454 lnc-ST3GAL1-7 ZFAT
GH08J134620 Enhancer 0.9 Ensembl ENCODE 0.4 +21.1 21144 4 ZNF316 NFIC ZKSCAN1 ARNT MEF2B ELF1 MAFK EBF1 IKZF1 MAFG lnc-ST3GAL1-7 ENSG00000278454 ZFAT
GH08J134631 Enhancer 1 Ensembl ENCODE 0.3 +30.7 30718 1.9 CTCF USF1 NCOR1 REST TOE1 RAD21 SMC3 FOXA2 RELA NFIC ZFAT lnc-ST3GAL1-7 ENSG00000278454
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000278454 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000278454 Gene

Genomic Locations for ENSG00000278454 Gene
chr8:134,600,257-134,600,336
(GRCh38/hg38)
Size:
80 bases
Orientation:
Plus strand

Genomic View for ENSG00000278454 Gene

Genes around ENSG00000278454 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000278454 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000278454 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000278454 Gene

Proteins for ENSG00000278454 Gene

Post-translational modifications for ENSG00000278454 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000278454 Gene

Domains & Families for ENSG00000278454 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000278454 Gene

Function for ENSG00000278454 Gene

Phenotypes From GWAS Catalog for ENSG00000278454 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000278454 Gene

Localization for ENSG00000278454 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000278454 Gene

Pathways & Interactions for ENSG00000278454 Gene

PathCards logo

SuperPathways for ENSG00000278454 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000278454 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000278454 Gene

Drugs & Compounds for ENSG00000278454 Gene

No Compound Related Data Available

Transcripts for ENSG00000278454 Gene

mRNA/cDNA for ENSG00000278454 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000278454 Gene

No ASD Table

Relevant External Links for ENSG00000278454 Gene

GeneLoc Exon Structure for
ENSG00000278454

Expression for ENSG00000278454 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000278454 Gene

Orthologs for ENSG00000278454 Gene

Evolution for ENSG00000278454 Gene

ENSEMBL:
Gene Tree for ENSG00000278454 (if available)
TreeFam:
Gene Tree for ENSG00000278454 (if available)

No data available for Orthologs for ENSG00000278454 Gene

Paralogs for ENSG00000278454 Gene

No data available for Paralogs for ENSG00000278454 Gene

Variants for ENSG00000278454 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000278454 Gene

Disorders for ENSG00000278454 Gene

No disorders were found for ENSG00000278454 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000278454 Gene

Publications for ENSG00000278454 Gene

No publications were found for ENSG00000278454 Gene.

No data available for Mastermind for ENSG00000278454 Gene

Products for ENSG00000278454 Gene

Sources for ENSG00000278454 Gene