Aliases for ENSG00000278376 Gene

Data sources for ENSG00000278376 Gene:

RNA type for ENSG00000278376 Gene

lncRNA

Aliases for ENSG00000278376 Gene

External Ids for ENSG00000278376 Gene

Summaries for ENSG00000278376 Gene

GeneCards Summary for ENSG00000278376 Gene

ENSG00000278376 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000278376 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000278376 Gene

Genomics for ENSG00000278376 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000278376 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J118787 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 -0.2 -246 6.4 SP1 ZNF207 NCOR1 MYC ZNF592 POLR2A CEBPA ZSCAN16 NFIC ZIC2 DDX6 ENSG00000278376 lnc-DDX6-3 piR-42419 piR-40269 VPS11 LOC105369519 KMT2A BCL9L HINFP
GH11J118796 Enhancer 0.3 Ensembl 0.4 +5.9 5913 1.2 CEBPB HLF TREHP1 CXCR5 ENSG00000245869 UPK2 BCL9L RN7SL688P FOXR1 ENSG00000222529 TREH lnc-DDX6-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000278376 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000278376 Gene

Latest Assembly
chr11:118,790,888-118,797,646
(GRCh38/hg38)
Size:
6,759 bases
Orientation:
Plus strand

Genomic View for ENSG00000278376 Gene

Genes around ENSG00000278376 on UCSC Golden Path with GeneCards custom track
ENSG00000278376 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000278376 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000278376 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000278376 Gene

Proteins for ENSG00000278376 Gene

Post-translational modifications for ENSG00000278376 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000278376 Gene

Domains & Families for ENSG00000278376 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000278376 Gene

Function for ENSG00000278376 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000278376 Gene

Localization for ENSG00000278376 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000278376 Gene

Pathways & Interactions for ENSG00000278376 Gene

PathCards logo

SuperPathways for ENSG00000278376 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000278376 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000278376 Gene

Drugs & Compounds for ENSG00000278376 Gene

No Compound Related Data Available

Transcripts for ENSG00000278376 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000278376 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000076A5CC_9606 lncRNA 1884 2

Ensembl: ENST00000610705 (view in UCSC) ,

LNCipedia: lnc-CXCR5-1:4,

URS0000D58596_9606 lncRNA 5025 2

LncBook: HSALNT0181945,

LNCipedia: lnc-CXCR5-1:10,

URS00008C26CC_9606 lncRNA 2586 2

LNCipedia: lnc-CXCR5-1:3,

NONCODE: NONHSAT024516.2,

URS0000D5C396_9606 lncRNA 2257 2

LncBook: HSALNT0181947,

LNCipedia: lnc-CXCR5-1:12,

URS00008BADF8_9606 lncRNA 1419 2

LNCipedia: lnc-CXCR5-1:2,

NONCODE: NONHSAT024520.2,

ENSG00000278376 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000278376 Gene

No ASD Table

Relevant External Links for ENSG00000278376 Gene

GeneLoc Exon Structure for
ENSG00000278376

No data available for mRNA/cDNA for ENSG00000278376 Gene

Expression for ENSG00000278376 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000278376 Gene

Orthologs for ENSG00000278376 Gene

Evolution for ENSG00000278376 Gene

ENSEMBL:
Gene Tree for ENSG00000278376 (if available)
TreeFam:
Gene Tree for ENSG00000278376 (if available)

No data available for Orthologs for ENSG00000278376 Gene

Paralogs for ENSG00000278376 Gene

No data available for Paralogs for ENSG00000278376 Gene

Variants for ENSG00000278376 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000278376 Gene

Disorders for ENSG00000278376 Gene

Additional Disease Information for ENSG00000278376

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000278376 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000278376 Gene

Publications for ENSG00000278376 Gene

No publications were found for ENSG00000278376 Gene.

No data available for Mastermind for ENSG00000278376 Gene

Products for ENSG00000278376 Gene

Sources for ENSG00000278376 Gene