Aliases for ENSG00000278250 Gene

Subcategory (RNA class) for ENSG00000278250 Gene

misc_RNA

Number of RNA Genes sources:

1 / 17

Aliases for ENSG00000278250 Gene

  • AC004815.1 5
  • RF00017 168

External Ids for ENSG00000278250 Gene

Summaries for ENSG00000278250 Gene

GeneCards Summary for ENSG00000278250 Gene

ENSG00000278250 is an RNA Gene, and is affiliated with the misc_RNA class.

Rfam classification for ENSG00000278250 Gene

  • Metazoan signal recognition particle RNA

Additional gene information for ENSG00000278250 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000278250 Gene

Genomics for ENSG00000278250 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000278250 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J120016 Enhancer 0.3 dbSUPER 600.7 -1.0 -1031 1.8 ZNF664 ENSG00000278250 BICDL1 RAB35 lnc-SIRT4-31
GH12J120011 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.7 -5.0 -4972 4.4 CREB1 ZNF629 RFX1 RFX5 BACH1 JUND LARP7 STAT3 RELA POLR2A BICDL1 RAB35 MLEC ENSG00000278250 lnc-SIRT4-31
GH12J120006 Enhancer 0.8 FANTOM5 ENCODE dbSUPER 0.4 -11.5 -11515 2.4 ZNF24 TBX21 BICDL1 RAB35 lnc-SIRT4-31 ENSG00000278250
GH12J120000 Enhancer 0.6 ENCODE 0.4 -18.2 -18227 0.2 RCOR2 SP1 CEBPA MAFK CREM SAP130 ZMYM3 CHD4 HNF4A NFIL3 lnc-SIRT4-31 BICDL1 ENSG00000278250 RAB35
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000278250 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000278250 Gene

Genomic Locations for ENSG00000278250 Gene
chr12:120,018,899-120,019,262
(GRCh38/hg38)
Size:
364 bases
Orientation:
Plus strand

Genomic View for ENSG00000278250 Gene

Genes around ENSG00000278250 on UCSC Golden Path with GeneCards custom track
ENSG00000278250 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000278250 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000278250 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000278250 Gene

Proteins for ENSG00000278250 Gene

Post-translational modifications for ENSG00000278250 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000278250 Gene

Domains & Families for ENSG00000278250 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000278250 Gene

Function for ENSG00000278250 Gene

Phenotypes From GWAS Catalog for ENSG00000278250 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000278250 Gene

Localization for ENSG00000278250 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000278250 Gene

Pathways & Interactions for ENSG00000278250 Gene

PathCards logo

SuperPathways for ENSG00000278250 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000278250 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000278250 Gene

Drugs & Compounds for ENSG00000278250 Gene

No Compound Related Data Available

Transcripts for ENSG00000278250 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000278250 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000A91129_9606 SRP_RNA 362 1

Ensembl: ENST00000617234 (view in UCSC) ,

URS00009A7E1B_9606 SRP_RNA 364 1

Rfam: RF00017,

ENSG00000278250 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000278250 Gene

No ASD Table

Relevant External Links for ENSG00000278250 Gene

GeneLoc Exon Structure for
ENSG00000278250

No data available for mRNA/cDNA for ENSG00000278250 Gene

Expression for ENSG00000278250 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000278250 Gene

Orthologs for ENSG00000278250 Gene

Evolution for ENSG00000278250 Gene

ENSEMBL:
Gene Tree for ENSG00000278250 (if available)
TreeFam:
Gene Tree for ENSG00000278250 (if available)

No data available for Orthologs for ENSG00000278250 Gene

Paralogs for ENSG00000278250 Gene

No data available for Paralogs for ENSG00000278250 Gene

Variants for ENSG00000278250 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000278250 Gene

Disorders for ENSG00000278250 Gene

No disorders were found for ENSG00000278250 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000278250 Gene

Publications for ENSG00000278250 Gene

No publications were found for ENSG00000278250 Gene.

No data available for Mastermind for ENSG00000278250 Gene

Products for ENSG00000278250 Gene

Sources for ENSG00000278250 Gene