Aliases for ENSG00000278107 Gene

Data sources for ENSG00000278107 Gene:

Subcategory (RNA class) for ENSG00000278107 Gene

lncRNA

Aliases for ENSG00000278107 Gene

External Ids for ENSG00000278107 Gene

Summaries for ENSG00000278107 Gene

GeneCards Summary for ENSG00000278107 Gene

ENSG00000278107 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000278107 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000278107 Gene

Genomics for ENSG00000278107 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000278107 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J076803 Enhancer 0.8 ENCODE 250.7 +1.7 1666 0.8 CTCF MAX TRIM22 EBF1 SMC3 RAD21 YY1 SMARCA5 MLLT1 ZFP37 ENSG00000278107 lnc-ZNF236-3 ZNF236 RNU6-346P ZNF236-DT ZNF516
GH18J076805 Enhancer 0.7 Ensembl ENCODE 250.7 -0.4 -392 1.9 CEBPA CTCF JUND SOX5 BHLHE40 ZNF3 JUN FOS SOX13 CREB1 ENSG00000278107 lnc-ZNF236-3 ZNF236 HSALNG0122595 ZNF236-DT ZNF516
GH18J076811 Enhancer 0.7 Ensembl 0.4 -6.0 -5965 0.2 NR2C1 ZNF395 REST SPI1 ELF1 IKZF1 TCF7 NR2F1 ESRRA ZNF217 ZNF236 ENSG00000278107 HSALNG0122595 lnc-ZNF236-3 ZNF236-DT ZNF516
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000278107 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000278107 Gene

Latest Assembly
chr18:76,805,150-76,805,736
(GRCh38/hg38)
Size:
587 bases
Orientation:
Minus strand

Genomic View for ENSG00000278107 Gene

Genes around ENSG00000278107 on UCSC Golden Path with GeneCards custom track
ENSG00000278107 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000278107 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000278107 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000278107 Gene

Proteins for ENSG00000278107 Gene

Post-translational modifications for ENSG00000278107 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000278107 Gene

Domains & Families for ENSG00000278107 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000278107 Gene

Function for ENSG00000278107 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000278107 Gene

Localization for ENSG00000278107 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000278107 Gene

Pathways & Interactions for ENSG00000278107 Gene

PathCards logo

SuperPathways for ENSG00000278107 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000278107 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000278107 Gene

Drugs & Compounds for ENSG00000278107 Gene

No Compound Related Data Available

Transcripts for ENSG00000278107 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000278107 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000078225C_9606 lncRNA 587 4

Ensembl: ENST00000622010 (view in UCSC) ,

LncBook: HSALNT0253436,

LNCipedia: ZNF236-DT:23,

NONCODE: NONHSAT178683.1,

URS00008B70C8_9606 lncRNA 4118 3

LncBook: HSALNT0253438,

LNCipedia: ZNF236-DT:21,

NONCODE: NONHSAT059956.2,

URS00019CDE71_9606 lncRNA 4725 1

ENA: MN297542.1:1..4725:ncRNA,

URS0001BF6F05_9606 lncRNA 4116 1

LncBook: HSALNT0253438,

URS0002080AB3_9606 lncRNA 2466 1

ENA: MK280239.1:1..2466:ncRNA,

ENSG00000278107 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000278107 Gene

No ASD Table

Relevant External Links for ENSG00000278107 Gene

GeneLoc Exon Structure for
ENSG00000278107

No data available for mRNA/cDNA for ENSG00000278107 Gene

Expression for ENSG00000278107 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000278107 Gene

Orthologs for ENSG00000278107 Gene

Evolution for ENSG00000278107 Gene

ENSEMBL:
Gene Tree for ENSG00000278107 (if available)
TreeFam:
Gene Tree for ENSG00000278107 (if available)

No data available for Orthologs for ENSG00000278107 Gene

Paralogs for ENSG00000278107 Gene

No data available for Paralogs for ENSG00000278107 Gene

Variants for ENSG00000278107 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000278107 Gene

Disorders for ENSG00000278107 Gene

No disorders were found for ENSG00000278107 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000278107 Gene

Publications for ENSG00000278107 Gene

No publications were found for ENSG00000278107 Gene.

No data available for Mastermind for ENSG00000278107 Gene

Products for ENSG00000278107 Gene

Sources for ENSG00000278107 Gene