Aliases for ENSG00000278017 Gene

Data sources for ENSG00000278017 Gene:

Subcategory (RNA class) for ENSG00000278017 Gene

lncRNA

Aliases for ENSG00000278017 Gene

External Ids for ENSG00000278017 Gene

Summaries for ENSG00000278017 Gene

GeneCards Summary for ENSG00000278017 Gene

ENSG00000278017 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000278017 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000278017 Gene

Genomics for ENSG00000278017 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000278017 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J062521 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 +1.7 1725 7.6 TBP ZBTB10 SP1 MXD4 FEZF1 NR2C1 MNT IKZF1 SMAD5 ETS1 ZCCHC2 ENSG00000278017 lnc-PIGN-7 TNFRSF11A ENSG00000199867 RELCH ENSG00000267430 PHLPP1 NONHSAG024039.2
GH18J062539 Promoter/Enhancer 1 EPDnew dbSUPER 0.4 -13.2 -13183 0.1 CEBPA HOMEZ RXRA SOX5 HNF4A REST CEBPG MAX SP1 ARID3A ZCCHC2 ENSG00000278017 ENSG00000279236 HSALNG0121992 PHLPP1 NONHSAG024039.2
GH18J062531 Promoter/Enhancer 0.9 Ensembl dbSUPER 0.4 -5.1 -5076 0.4 HOMEZ SAP130 FOXP1 SPI1 SOX5 NR2F6 ELF3 RXRB PPARG FOXA3 ENSG00000278017 ZCCHC2 ENSG00000279236 HSALNG0121992 PHLPP1 NONHSAG024039.2
GH18J062545 Enhancer 0.2 Ensembl 0.4 -19.0 -18976 0.6 ENSG00000279236 HSALNG0121992 ENSG00000278017 ZCCHC2 PHLPP1 NONHSAG024039.2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000278017 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000278017 Gene

Latest Assembly
chr18:62,525,918-62,526,325
(GRCh38/hg38)
Size:
408 bases
Orientation:
Minus strand

Genomic View for ENSG00000278017 Gene

Genes around ENSG00000278017 on UCSC Golden Path with GeneCards custom track
ENSG00000278017 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000278017 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000278017 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000278017 Gene

Proteins for ENSG00000278017 Gene

Post-translational modifications for ENSG00000278017 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000278017 Gene

Domains & Families for ENSG00000278017 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000278017 Gene

Function for ENSG00000278017 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000278017 Gene

Localization for ENSG00000278017 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000278017 Gene

Pathways & Interactions for ENSG00000278017 Gene

PathCards logo

SuperPathways for ENSG00000278017 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000278017 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000278017 Gene

Drugs & Compounds for ENSG00000278017 Gene

No Compound Related Data Available

Transcripts for ENSG00000278017 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000278017 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000076D49E_9606 lncRNA 408 2

Ensembl: ENST00000612025 (view in UCSC) ,

LNCipedia: lnc-PIGN-9:1,

URS0001BF3303_9606 lncRNA 407 1

LncBook: HSALNT0252223,

ENSG00000278017 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000278017 Gene

No ASD Table

Relevant External Links for ENSG00000278017 Gene

GeneLoc Exon Structure for
ENSG00000278017

No data available for mRNA/cDNA for ENSG00000278017 Gene

Expression for ENSG00000278017 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000278017 Gene

Orthologs for ENSG00000278017 Gene

Evolution for ENSG00000278017 Gene

ENSEMBL:
Gene Tree for ENSG00000278017 (if available)
TreeFam:
Gene Tree for ENSG00000278017 (if available)

No data available for Orthologs for ENSG00000278017 Gene

Paralogs for ENSG00000278017 Gene

No data available for Paralogs for ENSG00000278017 Gene

Variants for ENSG00000278017 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000278017 Gene

Disorders for ENSG00000278017 Gene

Additional Disease Information for ENSG00000278017

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000278017 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000278017 Gene

Publications for ENSG00000278017 Gene

No publications were found for ENSG00000278017 Gene.

No data available for Mastermind for ENSG00000278017 Gene

Products for ENSG00000278017 Gene

Sources for ENSG00000278017 Gene