Aliases for ENSG00000278004 Gene

Data sources for ENSG00000278004 Gene:

RNA type for ENSG00000278004 Gene

misc_RNA

Aliases for ENSG00000278004 Gene

External Ids for ENSG00000278004 Gene

Summaries for ENSG00000278004 Gene

GeneCards Summary for ENSG00000278004 Gene

ENSG00000278004 is an RNA Gene, and is affiliated with the misc_RNA class.

Rfam classification for ENSG00000278004 Gene

  • Pregnancy induced noncoding RNA

Additional gene information for ENSG00000278004 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000278004 Gene

Genomics for ENSG00000278004 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000278004 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J217282 Promoter/Enhancer 0.5 EPDnew dbSUPER 250.7 -0.7 -668 0.1 ENSG00000278004 DIRC3-AS1 HSALNG0022188 HSALNG0022182 lnc-DIRC3-6 TNP1 TNS1
GH02J217286 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.7 +4.1 4112 2.2 RAD51 BHLHE40 ZNF133 TOE1 USF2 USF1 CEBPB DIRC3 TNS1 ENSG00000278004 lnc-DIRC3-6 HSALNG0022182 DIRC3-AS1 TNP1
GH02J217288 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +6.9 6931 3.4 ZNF217 RAD51 MBD2 CUX1 TAL1 FOSL2 PKNOX1 FOXA1 MTA2 TEAD4 DIRC3 ENSG00000278004 lnc-DIRC3-6 HSALNG0022182 DIRC3-AS1 TNP1 TNS1
GH02J217292 Enhancer 0.6 Ensembl dbSUPER 0.4 +11.0 11042 0.4 JUND FOXA2 FOXA1 DIRC3 TMBIM1 ENSG00000278004 lnc-DIRC3-6 HSALNG0022182 DIRC3-AS1 TNP1 TNS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000278004 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000278004 Gene

Latest Assembly
chr2:217,283,370-217,283,523
(GRCh38/hg38)
Size:
154 bases
Orientation:
Plus strand

Genomic View for ENSG00000278004 Gene

Genes around ENSG00000278004 on UCSC Golden Path with GeneCards custom track
ENSG00000278004 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000278004 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000278004 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000278004 Gene

Proteins for ENSG00000278004 Gene

Post-translational modifications for ENSG00000278004 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000278004 Gene

Domains & Families for ENSG00000278004 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000278004 Gene

Function for ENSG00000278004 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000278004 Gene

Localization for ENSG00000278004 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000278004 Gene

Pathways & Interactions for ENSG00000278004 Gene

PathCards logo

SuperPathways for ENSG00000278004 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000278004 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000278004 Gene

Drugs & Compounds for ENSG00000278004 Gene

No Compound Related Data Available

Transcripts for ENSG00000278004 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000278004 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000065A371_9606 lncRNA 154 1

Ensembl: ENST00000616452 (view in UCSC) ,

ENSG00000278004 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000278004 Gene

No ASD Table

Relevant External Links for ENSG00000278004 Gene

GeneLoc Exon Structure for
ENSG00000278004

No data available for mRNA/cDNA for ENSG00000278004 Gene

Expression for ENSG00000278004 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000278004 Gene

Orthologs for ENSG00000278004 Gene

Evolution for ENSG00000278004 Gene

ENSEMBL:
Gene Tree for ENSG00000278004 (if available)
TreeFam:
Gene Tree for ENSG00000278004 (if available)

No data available for Orthologs for ENSG00000278004 Gene

Paralogs for ENSG00000278004 Gene

No data available for Paralogs for ENSG00000278004 Gene

Variants for ENSG00000278004 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000278004 Gene

Disorders for ENSG00000278004 Gene

No disorders were found for ENSG00000278004 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000278004 Gene

Publications for ENSG00000278004 Gene

No publications were found for ENSG00000278004 Gene.

No data available for Mastermind for ENSG00000278004 Gene

Products for ENSG00000278004 Gene

Sources for ENSG00000278004 Gene