Aliases for ENSG00000277757 Gene

Subcategory (RNA class) for ENSG00000277757 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000277757 Gene

  • Novel Transcript 5
  • NONHSAG005758.2 91
  • HSALNG0077646 164
  • Lnc-DEPP1-2 165
  • AL358394.3 5

External Ids for ENSG00000277757 Gene

Previous GeneCards Identifiers for ENSG00000277757 Gene

  • GC10M045016

Summaries for ENSG00000277757 Gene

GeneCards Summary for ENSG00000277757 Gene

ENSG00000277757 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000277757 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000277757 Gene

Genomics for ENSG00000277757 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000277757 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J045143 Enhancer 0.5 Ensembl 0.7 +3.0 2991 2.2 ZNF512 CEBPG ATF4 ZNF366 ARID1B ANKRD30BP3 ZNF22 ENSG00000277757 RSU1P2 ENSG00000243349 CUBNP3 OR13A1
GH10J044999 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.1 +146.8 146838 3.5 RNF2 ARHGAP35 GATAD2A REST ZNF512 POLR2A BACH1 JUND LARP7 ZNF143 ZNF22-AS1 ZNF22 piR-59386 piR-54572 PARGP1 WASHC2C ENSG00000273363 FAM21FP RASSF4 AGAP4
GH10J045105 Enhancer 0.5 Ensembl 0.3 +42.0 41991 1.8 TOE1 CEBPA RAD51 USF1 STAT1 HNF4A RXRA USF2 RSU1P2 piR-61945-043 CUBNP3 ENSG00000277757 ZNF22 OR13A1
GH10J045008 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas 0.1 +139.3 139265 0.9 CREB1 GATAD2A CTCF PRDM10 ZNF629 ZNF692 JUND FOXA1 GABPA PRDM1 CEP164P1 ZNF22 ENSG00000228702 MN309174-047 ENSG00000277757 OR13A1
GH10J045058 Enhancer 0.7 FANTOM5 Ensembl ENCODE 0.2 +88.9 88891 2 ZNF766 JUN HLF ZNF22-AS1 ZNF22 ALOX5 lnc-ZNF22-5 piR-45517-002 CEP164P1 ENSG00000277757 OR13A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000277757 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000277757 Gene

Genomic Locations for ENSG00000277757 Gene
chr10:45,002,222-45,147,892
(GRCh38/hg38)
Size:
145,671 bases
Orientation:
Minus strand

Genomic View for ENSG00000277757 Gene

Genes around ENSG00000277757 on UCSC Golden Path with GeneCards custom track
ENSG00000277757 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000277757 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000277757 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000277757 Gene

Proteins for ENSG00000277757 Gene

Post-translational modifications for ENSG00000277757 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000277757 Gene

Domains & Families for ENSG00000277757 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000277757 Gene

Function for ENSG00000277757 Gene

Phenotypes From GWAS Catalog for ENSG00000277757 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000277757 Gene

Localization for ENSG00000277757 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000277757 Gene

Pathways & Interactions for ENSG00000277757 Gene

PathCards logo

SuperPathways for ENSG00000277757 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000277757 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000277757 Gene

Drugs & Compounds for ENSG00000277757 Gene

No Compound Related Data Available

Transcripts for ENSG00000277757 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000277757 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00008BB50F_9606 lncRNA 653 4

Ensembl: ENST00000602156 (view in UCSC) ,

LncBook: HSALNT0162114,

LNCipedia: lnc-DEPP1-2:8,

NONCODE: NONHSAT013061.2,

URS00009B6FB5_9606 lncRNA 213 4

Ensembl: ENST00000625472 (view in UCSC) ,

LncBook: HSALNT0162116,

LNCipedia: lnc-DEPP1-2:6,

NONCODE: NONHSAT156959.1,

URS00008BDB9E_9606 lncRNA 832 3

Ensembl: ENST00000599308 (view in UCSC) ,

LNCipedia: lnc-DEPP1-2:3,

NONCODE: NONHSAT013063.2,

URS00008C3F22_9606 lncRNA 2472 3

LncBook: HSALNT0162112,

LNCipedia: lnc-DEPP1-2:19,

NONCODE: NONHSAT013060.2,

URS00009AE3A8_9606 lncRNA 1590 3

LncBook: HSALNT0162128,

LNCipedia: lnc-DEPP1-2:2,

NONCODE: NONHSAT013076.2,

ENSG00000277757 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000277757 Gene

No ASD Table

Relevant External Links for ENSG00000277757 Gene

GeneLoc Exon Structure for
ENSG00000277757

No data available for mRNA/cDNA for ENSG00000277757 Gene

Expression for ENSG00000277757 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000277757 Gene

Orthologs for ENSG00000277757 Gene

Evolution for ENSG00000277757 Gene

ENSEMBL:
Gene Tree for ENSG00000277757 (if available)
TreeFam:
Gene Tree for ENSG00000277757 (if available)

No data available for Orthologs for ENSG00000277757 Gene

Paralogs for ENSG00000277757 Gene

No data available for Paralogs for ENSG00000277757 Gene

Variants for ENSG00000277757 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000277757 Gene

Disorders for ENSG00000277757 Gene

No disorders were found for ENSG00000277757 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000277757 Gene

Publications for ENSG00000277757 Gene

No publications were found for ENSG00000277757 Gene.

No data available for Mastermind for ENSG00000277757 Gene

Products for ENSG00000277757 Gene

Sources for ENSG00000277757 Gene